Bubalus bubalis (water buffalo): 102389413
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Entry
102389413 CDS
T05912
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbub03016
]
102389413 (TRDMT1)
Enzymes [BR:
bbub01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
102389413 (TRDMT1)
Transfer RNA biogenesis [BR:
bbub03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102389413 (TRDMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
102389413
NCBI-ProteinID:
XP_025120128
EnsemblRapid:
ENSBBUG00015016796
LinkDB
All DBs
Position
14:52187776..52278527
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AA seq
394 aa
AA seq
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MRERRGRGGRRNHGTGRPSSKEEAVAAREWSPCGPWSSTAELGACTRLSEKAVYLHKWWL
LLRSTPLLMKCTSTIFLTHSSWPRRLKIGLQGDVTDPRTNSFLYILDILPRLQKLPKYIL
LENVKGFEISSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQPEPFPFQ
APGQVLMEFPKTESEHPPKYAINAEKKTEEKKTEPNICFDSSTQCSGKDTILFKLETAGE
IARKHQQDSDLSVRMLKDFLEDDIDKHSFFLPPKSLLRYALLLDIVKPTSRRSMCFTKGY
GRYIEGTGSVLQTTEDVQIENIYKSLTSLSQEEKIMRLSMLQLRFFTPKEIANLLGFPPE
FGFPEMTTIKQRYRLLGNSLNVHVVAKLIKILCD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgagggagcggcggggccgggggggaaggaggaatcacgggaccggcaggcctagctcc
aaggaggaggcggtggcggcgcgggaatggagcccttgcgggccctggagctctacagcg
gaattgggggcatgcaccaggctctcagagaaagctgtatacctgcacaagtggtggctg
ctgttgaggtcaacaccgttgctaatgaagtgtacaagtacaattttcctcacacacagc
tcctggccaagacgattgaaaattggcctgcaaggtgatgtgactgatccaaggacaaat
agcttcttatatattctagacattctcccaagattacaaaaattaccgaagtatattctt
ttagaaaacgttaaaggttttgaaatatcttctacaagagatctgttaatacaaacaata
gaaaattgtggttttcagtaccaagaatttctactgtctccaacctctcttggcattcca
aattcaagattacggtacttccttattgcaaagcttcagccagagccattcccttttcag
gcccctggtcaggtactgatggagttccccaaaactgaatctgaacatccccctaaatat
gcaataaatgcagaaaagaaaactgaagaaaagaaaactgaaccaaatatttgctttgat
agcagcacacaatgttctggaaaagacaccattctttttaagcttgaaactgcaggggaa
attgccaggaaacatcaacaggacagcgatctctctgtgcgaatgctaaaagattttctt
gaagatgacattgacaagcattcattctttttaccaccaaagtcattactgcgatatgct
cttttgttagacattgttaaacccacttccagaagatccatgtgctttacaaaaggttat
ggacgctacatagaagggacaggatctgtgttacagacgacagaggatgtgcagattgag
aatatctacaaatcccttaccagtttgtcacaagaagaaaagataatgagattgtcaatg
cttcaacttcgatttttcactcctaaagaaatagcaaatctccttggatttcctccagag
tttggatttcctgagatgacaactatcaaacagcgttatcgtctacttggaaatagtctc
aacgtgcatgttgtagctaaactaatcaaaatcctatgtgactaa
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