Bubalus bubalis (water buffalo): 102403040
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Entry
102403040 CDS
T05912
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X4
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04014
Ras signaling pathway
bbub04015
Rap1 signaling pathway
bbub04020
Calcium signaling pathway
bbub04024
cAMP signaling pathway
bbub04080
Neuroactive ligand-receptor interaction
bbub04713
Circadian entrainment
bbub04720
Long-term potentiation
bbub04724
Glutamatergic synapse
bbub05010
Alzheimer disease
bbub05014
Amyotrophic lateral sclerosis
bbub05016
Huntington disease
bbub05017
Spinocerebellar ataxia
bbub05020
Prion disease
bbub05022
Pathways of neurodegeneration - multiple diseases
bbub05030
Cocaine addiction
bbub05031
Amphetamine addiction
bbub05033
Nicotine addiction
bbub05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
102403040 (GRIN1)
04015 Rap1 signaling pathway
102403040 (GRIN1)
04020 Calcium signaling pathway
102403040 (GRIN1)
04024 cAMP signaling pathway
102403040 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102403040 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
102403040 (GRIN1)
04720 Long-term potentiation
102403040 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
102403040 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102403040 (GRIN1)
05014 Amyotrophic lateral sclerosis
102403040 (GRIN1)
05016 Huntington disease
102403040 (GRIN1)
05017 Spinocerebellar ataxia
102403040 (GRIN1)
05020 Prion disease
102403040 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
102403040 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
102403040 (GRIN1)
05031 Amphetamine addiction
102403040 (GRIN1)
05033 Nicotine addiction
102403040 (GRIN1)
05034 Alcoholism
102403040 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bbub04040
]
102403040 (GRIN1)
Ion channels [BR:
bbub04040
]
Ligand-gated channels
Glutamate (ionotropic)
102403040 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
102403040
NCBI-ProteinID:
XP_025117936
EnsemblRapid:
ENSBBUG00015021191
LinkDB
All DBs
Position
12:105556283..105580054
Genome browser
AA seq
943 aa
AA seq
DB search
MSTMRLLTLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHVILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDHKRGPKAEKVLQFDPGTKNVTALLLEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
VDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAFTSTLASSFKRRRSSKDTQYHPTDITGPLNLSDPSVSTVV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgaccctcgccctgcttttctcctgctccttcgcccgcgcc
gcctgcgaccccaagatcgtcaacatcggcgcggtgctgagcacgcggaagcacgagcag
atgttccgcgaggctgtgaatcaggccaacaagcggcatggctcctggaagatccagctg
aacgccacctccgtcacgcacaagcccaacgccatccagatggccctgtcggtgtgcgaa
gacctcatctccagccaggtctacgccatcctagttagccacccacctacccccaacgac
cacttcacacccacccccgtctcctacacggccggcttctaccgcatccccgtcctgggg
ctgaccacgcgcatgtccatctactcagacaagagcatccacctgagcttcctgcgcacc
gtgccgccctactcccaccagtccagcgtctggttcgagatgatgcgcgtctacagctgg
aaccacgtcatcctcctggtcagcgacgaccacgagggccgggcggcgcagaaacgcctg
gagacgctgctggaggagcgcgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgaccacaagcgcggacccaaggcggagaaggtgctgcagttcgacccg
gggaccaagaacgtgacggcgctgctgctggaggcgcgggagctggaggcccgggtcatc
atactgtccgccagcgaggacgacgctgccaccgtgtaccgcgcagccgcgatgctgaac
atgacgggctcggggtacgtgtggctggttggggagcgcgagatctcggggaacgccctg
cgctacgccccggacggcatcatcgggctgcagctcatcaacggcaagaacgagtcggcg
cacatcagcgacgccgtgggcgtggtggcccaggccgtgcacgagctgctcgagaaggag
aacatcaccgacccgccgcggggctgtgtgggcaacaccaacatctggaagaccgggccg
ctcttcaagagggttctgatgtcttccaagtatgcagacggggtgaccggccgtgtggaa
ttcaacgaggatggggaccggaagtttgccaactacagcatcatgaacctgcagaaccgc
aagctggtacaagtgggcatctacaacggcactcatgtcattcccaatgacaggaagatc
atctggccgggtggagagaccgagaaacctcgcggctatcagatgtccaccaggttgaag
atcgtgacgatccaccaggagcccttcgtgtatgtcaagcctacgctgagcgacggcacg
tgcaaggaggagttcaccgtcaacggggacccggtcaagaaggtgatctgcactgggccc
aatgacacgtcgccaggcagcccgcgccacacggtgcctcagtgctgctatggcttctgc
gtcgatctgctcatcaagctggcgcggaccatgaacttcacgtacgaggttcacctggtg
gccgacggcaagttcggcactcaggagcgggtgaacaacagcaataagaaggagtggaac
gggatgatgggcgagctgctcagcgggcaggcggacatgatcgtggccccgctgaccatc
aacaacgagcgcgcgcagtacatcgagttctcgaagcccttcaagtaccagggcctgacc
attctggtcaagaaggagatcccccggagcacgctggactccttcatgcagcccttccag
agcacgctgtggctgctggtggggctgtccgtgcacgtggtggccgtgatgctgtacctg
ctggaccgcttcagccccttcggccggttcaaagtgaacagcgaggaggaggaggaggat
gcgctgaccctgtcttcggctatgtggttctcctggggcgtcctgctcaattcaggcatc
ggggaaggcgcccccagaagcttctcggcgcgcatcctgggcatggtgtgggcggggttc
gccatgatcattgtggcctcctacaccgccaacctggcagccttcctggtgctggaccgg
cccgaagagcgcattaccggcatcaacgacccgcgactgaggaatccctcggacaagttc
atctacgcgacggtgaagcagagctcagtggacatctacttccggcggcaggtggagctg
agcaccatgtaccggcatatggagaagcacaactacgagagcgcagcggaggccatccag
gcagtgcgcgacaacaagctgcacgccttcatctgggactcggcggtgctggagttcgag
gcctcgcagaagtgcgacctggtgaccacgggcgagctcttcttccgctcgggctttggc
atcggcatgcgcaaggacagcccctggaaacagaacgtctccctgtccatcctcaagtcc
cacgagaacggcttcatggaagacctagacaagacgtgggttcggtaccaggagtgcgat
tcacgcagcaacgcccctgctaccctcaccttcgagaatatggcaggggtcttcatgctg
gtggctgggggcatcgtggccgggatctttctgatcttcatcgagatcgcctataaacgg
cacaaggacgcccggcggaagcagatgcagctggcgtttgcggctgtgaacgtgtggagg
aagaacctgcaggatagaaagagtggtagagcagagcccgaccctaaaaagaaagccaca
tttagggctttcacctccaccctggcttccagcttcaagagacgtaggtcctccaaagac
acgcagtaccatcccactgatatcacgggcccgctcaacctctcagatccctcggtcagc
accgtggtgtga
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integrated database retrieval system
