Bubalus bubalis (water buffalo): 102407055
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Entry
102407055 CDS
T05912
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03440
Homologous recombination
bbub03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102407055 (BRIP1)
03460 Fanconi anemia pathway
102407055 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102407055 (BRIP1)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102407055 (BRIP1)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102407055 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
102407055 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
EAP30
Motif
Other DBs
NCBI-GeneID:
102407055
NCBI-ProteinID:
XP_025136948
EnsemblRapid:
ENSBBUG00015003014
LinkDB
All DBs
Position
3:complement(51803120..51993633)
Genome browser
AA seq
1171 aa
AA seq
DB search
MMSSAEYTIGGVKINFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSAL
AWQQSLSGKPMDESLSKKTEVPLSCCCTCHSKNSANSDVHQRTSHHFSSPSTPPSERNGT
LSGSQDSPEKTTLAAKLSAKKQASMYRDENDDFQVEKKRIRPLETAQQIRKRHCFEKEVH
HLDAKVASEKTTKLNSPLGKINSISPQNPPGHCSRCCCSTKQGNSEDSSNTTKKDHGGKF
KIPKIYFGTRTHKQIAQITRELQRTAYSGVPMTILSSRDHTCIHPEVMGNFNRNEKCMEL
LDGKNGKSCYFYHGVHKMSDQHTLQTCQGMHKAWDIEELVSLGRKLKACPYYTARELMQN
ADIIFCPYNYLLDAQIRETMDINLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDE
LDSMINYNIRKKDHEPLRAVCCSLINWLEASSEHLVERDYESSCKVWSGSEMLLNLHKMG
ITTATFPILQGHFSAVLQREEKVPSIHGKEEAREIPVISASTQIMLKGLFMVLDYLFRQN
SRFADDYKVAIQQTYSWINQTDTTDHGFLILSKNKKRSRQKAAVHVLNFWCLNPAVAFSD
INGKVWAIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRSLCA
TYQHTETFEFQDEVGALLLSVCQTISQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKT
VIAEPQGGEKIDFDELLQIYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVVTI
GIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGAL
ILVDDRFRSNPSRYISGLSKWVRQLIQHHSTFESALESLAEFAKKHQKVIAASKEDRKSI
QDGEPTLGVACLKDSTYFLEAASHLSPEYAMEDDPELLEESAQAVGAEGIVISRSTSPTF
SKQIDQVSWSGSNFGGQCLTGKILTATPMFRSSEDCASTSSTFKTEKKCETVLPLTDKYE
SSSLIVDTSFGACPQSETIVPSTNVDATNLNSEDPAIQLSVVSEEAEPSPSTTASETEAE
DESIYFTPELYDPVETNEEKNELVGTERDSRLTNSSNCILTEDLFEIKTTKGVDSVREMK
AEDCTDTKLKRLMPIKENKVDLGSNVKTTHK
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcagctgaatatacaattggtggggtgaagattaactttccttgtaaagct
tatccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaagcagcac
tgtttattggagagccccacagggagtgggaaaagcttagccttactttgttctgcttta
gcatggcaacagtctcttagtgggaagccaatggatgaaagcttaagtaagaaaactgaa
gtaccattgtcgtgttgttgtacatgccattcaaagaattctgccaacagtgatgtgcac
cagcgaacttcgcatcatttcagcagtccaagtacaccaccttctgaaagaaatggcact
ttgtcaggttctcaagactcccctgaaaaaactacactggctgcaaagctatctgctaag
aagcaggcatctatgtacagagacgaaaatgatgattttcaagtagagaagaaaagaatt
cgacccttggaaacagcacagcagatcagaaaacgtcattgttttgagaaggaggtacat
catttggatgcaaaagttgcttcagaaaagaccacaaaactcaactctccattaggaaag
ataaactccatttctccacagaatccccctggtcactgttctaggtgctgttgttctacc
aaacaaggaaacagtgaagattcttcaaataccactaagaaggatcatggggggaagttc
aagatacccaaaatatattttgggacacgcacacacaagcagattgctcagattactaga
gagctccagagaacagcatactcaggggtcccgatgactattctttccagcagggatcat
acttgtatccatccggaagtaatgggtaacttcaacagaaatgaaaagtgcatggaattg
ctggatggaaaaaatggaaaatcctgctatttttatcatggtgttcataaaatgagtgat
caacacacattacagacttgccaagggatgcacaaggcctgggatatagaagaacttgtc
agcttggggagaaaactaaaggcatgtccatattacacagcacgagaactaatgcaaaat
gctgacataatattttgtccctacaactatcttctagatgcacagataagggaaactatg
gacatcaatctgaaagaacaggttgtcattttagatgaagctcataacattgaggactgt
gctcgggaatcagcaagttacagtgtaacggaagttcagcttcggtttgctcgggatgaa
ctagatagtatgattaactataatataaggaagaaagatcatgaacccctacgagctgtg
tgctgtagcctcattaattggttagaagcaagctctgaacatcttgtggaaagggattat
gaatcatcctgtaaagtatggagtggaagtgaaatgctcttaaatttacacaaaatgggc
atcaccactgctacttttcccattttgcaggggcatttttctgctgtccttcaaagagaa
gaaaaagtcccatcaattcatggtaaagaggaggcaagagaaatacctgttattagtgct
tcaactcaaataatgctcaaaggactttttatggtgcttgactatctttttaggcaaaat
agcagatttgcagatgattataaagttgctattcaacagacttactcttggataaatcag
actgatactacagatcatgggttcttgattctatcaaaaaataagaaacgttcacggcag
aaagcagcagttcatgtgctaaatttttggtgcttaaatccagctgtggccttttcagat
attaatggcaaggtttgggcaattgttttgacatctgggacattatcaccaatgaaatcc
ttttcatcagaacttggtgttacatttactattcaactagaggctaatcatgtcattaat
aactcacaggtttgggttggcaccattgggtcagggcccaagggtcgcagtctctgtgct
acctaccagcacacggaaacatttgaattccaggatgaagtgggagctcttttgttatct
gtgtgccagactattagccaaggaattttgtgtttccttccatcttacaagttattagaa
aagttaaaagaacgttggctctctactggcttatggcataatctggagttggtgaagaca
gtcattgcagaaccacagggaggagaaaaaattgattttgatgaattactgcagatatac
tacgatgcaatcaagtacaaaggagaaaaagatggagccctcctggtggcagtttgtcgt
ggtaaagtgagtgagggtctggatttctcagatgataatgcccgcgctgtcgtaacaata
ggaattccttttccaaatgtgaaagatcttcaggttgaactgaagagacagtataatgat
cagcattcaaaattaagaggtcttttaccaggtcgtcaatggtatgaaattcaagcatac
agggccttaaaccaggcccttggtaggtgtattcgacacaagaatgattggggggctctt
attctagtcgatgatcgcttcaggagtaacccaagtcgatacatatctggactttctaaa
tgggttcgacagttgattcagcaccattcaacctttgagagtgcactggagtccttggct
gaattcgccaaaaagcaccaaaaggtcattgctgcatccaaagaagacagaaaatctata
caggacggtgagcctacacttggagtggcttgtttgaaggacagtacctattttttagaa
gcagcaagccatttatcaccagaatatgctatggaagatgatccagaattattagaagag
tctgcccaggcagtaggagcagaaggaattgtgatttccagatccacaagcccaaccttc
agcaaacaaatagaccaagttagctggtctgggagtaatttcgggggacagtgtcttact
ggtaaaattctgactgcaacacctatgtttaggtcatcagaggactgtgcttctacttct
tccactttcaaaacagaaaagaaatgtgaaacagttttgccgctcactgataaatatgag
tcctcatctctgatagtagatacatcatttggagcatgccctcaatcagaaaccattgtt
ccatctacaaacgttgatgctactaatctgaattcagaagatccagcaattcagttgtct
gtagtaagtgaagaagctgaaccttctccttcaactacagcttctgaaacagaagcagag
gatgaatctatctattttacacctgaactttatgatcctgtagagacaaatgaagaaaag
aatgaactagttggaactgagagagacagtagattgactaatagttcaaattgcatttta
actgaagatctttttgaaattaaaactacgaaaggagtggattcagtcagagaaatgaaa
gccgaggactgcacagacacaaagttgaaaagactcatgcctattaaagaaaataaagtt
gaccttggtagtaatgtaaaaacaactcataaatga
DBGET
integrated database retrieval system
