Bubalus bubalis (water buffalo): 102411375
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Entry
102411375 CDS
T05912
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102411375 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102411375 (POLR1B)
Enzymes [BR:
bbub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102411375 (POLR1B)
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102411375 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
102411375
NCBI-ProteinID:
XP_006056043
EnsemblRapid:
ENSBBUG00015017840
LinkDB
All DBs
Position
12:45784183..45805609
Genome browser
AA seq
1135 aa
AA seq
DB search
MDPGGRWRDLPSGPSLKHLTDPSYGIPREQQKPALQELTRAHVESFNYAVREGLSHAVQA
VPPFEFAFKDERICLTIVDAVISPPAVPKGSICKELNVYPAECRGRRSTYRGKLTADISW
SVNGISKGVIKQFLGYVPIMVKSKLCNLYNLPPKALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMVRPKWKSRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEDDSFFRNSVSQMLRIVMEEGCSTQKQV
LNYLGERFRVKLSLPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAKGE
CMEENPDSLMNQEVLTPGQLFLMFLKEKLEAWLVSIKIAIDKKSQKTNVSLNSENLMKIF
SLGIDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVTQSVYTASIPALLCNLGVT
PVDGTPHRPYSECYPVLLDGVMIGWADKEIAPGIADSLRHFKVLREKRIPPWMEVALIPM
TGKPSLYPGLYLFTTPCRLVRPVQNLELGKEELIGTMEQIFMNVAIFEDEVLAGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTFRDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSERIKQGDDSLVFGVKPGDPRVLQKLDDDGLPFIGAQLKYGDPYYSYLNLNTGEGFVMY
YKSKENCIVDNIKVCSNDTGNGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPVE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNYYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSALRNRKYSCALCNRSDTIDTISVPYVFRYFVAELAAMNIKVKLDIV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggtggccggtggcgagacctgcccagtgggcccagcctaaagcacttgacc
gacccctcttacgggatcccgcgggaacagcaaaagccagcgttgcaggagctgacgcgg
gcgcatgtcgagtctttcaactacgctgtgcgcgaagggctcagccacgcggtgcaggcc
gtccctccctttgaatttgctttcaaagatgagcggatctgtctcaccattgtggatgcc
gtcatcagccctcccgccgttcccaaagggagcatctgcaaagagctcaacgtttatcca
gcagagtgccgaggccggaggagcacctaccggggaaagctgacagccgatatcagctgg
tcagtgaatggaatctcaaaaggagtcattaagcagtttctgggctacgttcccatcatg
gtgaaatccaagctttgcaacttatacaaccttcctccaaaagccctcatcgagcaccat
gaggaagcagaggaaatgggaggctattttatcatcaatggcattgaaaaagtcatccga
atgttgattatgcctcgcagaaatttccccattgcaatggtaagaccaaagtggaaaagc
agagggcctggctacactcagtatggagtttcaatgcactgtgtgagagaggaacattcc
gctgtcaatatgaaccttcactacttggaaaatggcacggttatgttgaactttatttac
cggaaagaactgtttttccttcctttgggatttgcacttaaggcactcgtcagcttttcc
gattatcagatttttcaggagctcatcaaaggaaaggaggatgactctttctttaggaac
tcggtttctcagatgttaaggatcgtaatggaagagggatgttccacacaaaaacaggtc
cttaactatctgggggagcgcttcagagtgaaactcagccttcctgactggtacccgaac
gaacaagctgcagagtttctgttcaaccagtgtatctgtatccacctgaaatccaacact
gagaagttctatatgctttgtctcatgacccggaagctctttgctttagccaaaggagag
tgcatggaggagaatcctgacagtttaatgaaccaagaggttctaactcctggtcagctc
ttcctcatgtttctgaaggaaaaattggaagcttggttagtgtctattaaaatagctata
gacaagaagtctcagaagaccaatgtgtccttaaacagtgaaaatttgatgaagattttt
agtctgggaatagaccttacaaaaccatttgaataccttcttgctactggaaatctacgt
tctaaaacaggtcttggcttcctgcaagattctggactttgcgtcgtggctgacaagctg
aacttcatacgctatctctcccatttccgctgtgtgcacagaggggctgattttgctaaa
atgcggaccaccactgtgcgcaggctgctgccggagtcctggggcttcctttgtcccgtg
cacacccctgacggggaaccctgtggactgatgaaccacttaactgccatctgtgaggtc
gtcacacagtctgtgtacacagcatctattccggctctactctgcaacctgggggtcact
ccagttgacggaactccacatcggccgtacagtgagtgctaccctgtcctgctggacggt
gtcatgattggctgggccgataaggagattgcccctggcattgctgattctctccgacat
tttaaggtgttgagagaaaaaagaattcctccctggatggaggtggccctgatccccatg
acaggaaaaccaagtctgtacccaggattgtacctttttaccactccttgtcgactggtg
cggcctgtgcagaacttggaactaggcaaagaagaactgattggaactatggaacagatc
ttcatgaatgttgccatcttcgaggatgaagttctggctggggtcaccacgcaccaggag
ctcttccctcacagcctgctgagtgtgatcgccaacttcatccctttctcagatcacaac
cagagtccgagaaatatgtaccagtgccagatgggtaagcagaccatgggctttccactt
ctcacttttcgagatcgatcagataataaactgtatcgtcttcagactccacagagccct
ttagtaagaccgtacatgtatgattattatgacatggataactatccaattgggacaaat
gccattgttgctgttatctcttacactggctacgatatggaagatgccatgattgtgaat
aaggcctcttgggaacgaggctttgcccatggaagtgtctacaagtctgaattcatagat
ctgtctgaaagaattaaacaaggagatgatagtctggtctttggagtcaaacctggagac
ccacgggttctgcagaagttggacgatgatggattgccatttattggagcacaactgaag
tatggagatccatattacagctacctaaacctcaacaccggggaaggctttgtgatgtac
tataagagtaaagaaaactgtattgtggataacatcaaagtgtgcagtaatgataccgga
aatggcaagttcaagtgtgtgtgcatcacgatgcgagtcccccggaacccaacaattgga
gataagttcgccagtcgtcacgggcagaagggcatcttgagcaggctgtggccagtggag
gacatgccattcaccgagagcgggatggtccctgacattctgttcaacccccatggtttt
ccatcccgcatgaccataggcatgctgatcgagagcatggccggcaagtctgcagctctg
cacgggctctgccatgacgccacccccttcatcttctcagaggagaactcagccctggag
tacttcggcgagatgctgaaggccgctggctacaactactatggcaccgagaggttgtac
agtggcattagtgggctggagctagaagcagacatcttcataggcgtggtgtactaccag
cgtttacgccacatggtctctgacaaattccaagtgaggaccacaggagcccgagacaaa
gtcactaaccagcctataggggggagaaacgtccagggtggaatccgttttggggagatg
gagcgggatgcccttttagctcacggtacatcttttctcctccacgaccgcctgttcaac
tgctcggatcggtcagtggcccacgtgtgtgtgaagtgtggtagtctgctctcccctctg
ttggagaagccacccccatcgtggtccgccctgcgcaacaggaagtacagctgtgccctc
tgtaaccgcagtgacaccattgacaccatctccgtgccttatgtctttcggtattttgta
gctgaactggcagctatgaacatcaaagtgaaactggacatcgtttaa
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integrated database retrieval system
