KEGG   Bubalus bubalis (water buffalo): 102414403
Entry
102414403         CDS       T05912                                 
Symbol
POLR2F
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X1
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub03020  RNA polymerase
bbub03420  Nucleotide excision repair
bbub04623  Cytosolic DNA-sensing pathway
bbub05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102414403 (POLR2F)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102414403 (POLR2F)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    102414403 (POLR2F)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    102414403 (POLR2F)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbub03021]
    102414403 (POLR2F)
   03400 DNA repair and recombination proteins [BR:bbub03400]
    102414403 (POLR2F)
Transcription machinery [BR:bbub03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     102414403 (POLR2F)
  RNA polymerase III system
   RNA polymerase III
     102414403 (POLR2F)
  RNA polymerase I system
   RNA polymerase I
     102414403 (POLR2F)
DNA repair and recombination proteins [BR:bbub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102414403 (POLR2F)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 102414403
NCBI-ProteinID: XP_025138669
EnsemblRapid: ENSBBUG00015001157
LinkDB
Position
4:complement(10211401..10219767)
AA seq 159 aa
MSDNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARVTTLMYLDLSPVTGPGRSPS
SFAATCPTGATKTGASTSSSSPTEPESTSGLGLRPWLVS
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtcagacaacgaggacaattttgatggagacgactttgatgacgtggaggaggatgaa
gggctcgatgacttggagaatgccgaggaggagggccaggagaacgttgagattctccct
tctggagagcgaccgcaggccaaccagaaacgaatcaccacaccatatatgaccaagtat
gagcgagcccgtgtgctgggcacccgagcccttcagattgcgatgtgcgcccctgtgatg
gtggagctggagggggagacagatcccttactgatcgccatgaaggagctcaaagccagg
gtcaccaccctcatgtacctcgacctctccccggtcacagggcccggaagatccccatca
tcattcgccgctacctgcccgacgggagctacgaagactggggcgtcgacgagctcatca
tcaccgactgagccggagtcaacctctggactgggcctccgcccgtggctcgtctcatag

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