Bufo bufo (common toad): 120978438
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Entry
120978438 CDS
T07950
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120978438 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
bbuf04090
]
120978438 (VCAM1)
04091 Lectins [BR:
bbuf04091
]
120978438 (VCAM1)
CD molecules [BR:
bbuf04090
]
Proteins
120978438 (VCAM1)
Lectins [BR:
bbuf04091
]
I-type lectins (Siglecs)
120978438 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
V-set
ICAM_N
Izumo-Ig
Ig_4
Ig_6
BTD
Ig_5
Kre9_KNH
Invasin_D3
Motif
Other DBs
NCBI-GeneID:
120978438
NCBI-ProteinID:
XP_040262489
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All DBs
Position
9:73702091..73716543
Genome browser
AA seq
895 aa
AA seq
DB search
MEKTSTLTITLLMLSFHIIFMHTSASDITLSSPQTTIKAQIGEELQITCLASKCRGEKPG
FTWSNLVDSTLSGTVNTMEKKSTLTMKVGAETDGSYRCTVTCDNAPVEKRFHIVVYSLPS
DPILHISSLVVGQQSHITCIFPNIYPYERMGAEILLDDKVVVTFDSAKIDLNIYEMQNIS
LTHDITLVEEMDKKEVKCLALLEFPDYAIDPIERHTAQNLILMYPPELPQITVLTSTNVK
AGEEIHLLCSSDSKSQAVVQWVKMMEDEELEMSSDDQGALILSNAVPENSGVYICYAKNI
AGKTASQVEINVQGLPEKPVLFLNPGTKVEAGQSVIIECLVNSNIKVTLWKMSEDRDILI
FLDSTGKTIIDEADPIDTAVYKCIAENQYGVSETSESLTVEYPPRETLLSSSPTDVNEGD
TVTLTCVSKGVPTPSISIYKLLTSGESVLLSKDPVVTLSEVTSGIYQCQANNRLGSDKDK
LELIVQAPPKNTRIIITPSHTVRKGDSVHIQCISESSPAPKLVLRMETELGIIGLESEHG
QYSISHAAVEHTGTYICESSNVIGQQIAEANLTVQAPPQNTQIFITPSSVVREGDNVQIR
CTSEALPAPRLALKMKMEHDVVDLESVGAEYNISNAEVRHTGTYICESTNAAGSEIVETT
LNVEVPPRNTYITIIPSPVVREGDSVQIWCSSDGSPDPSLVLKMKTEFELIMLELFDGSY
NITHAGMENTGTYICESTNRVGNHVAETTLTVQIPPRNTTVVVTPSQNIKEGDTVTITCE
THSIPSPTIILQKVCAKNNTLLQTNNGTFTLHNVTLNDTGTYTLQIISSAGNETEVINIQ
VQERQQSPRFNPTSIFIFGSVAFVSLGAIASIIYHLKKSKLQGSYSLVKALRSKV
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaccagtactctcaccatcacgttactgatgctcagctttcacatcatcttt
atgcacacttctgcctcagacatcactctttcatcaccacagactacaatcaaggctcag
attggggaagaacttcaaatcacttgtttagcatcaaaatgtaggggtgagaagcctggc
ttcacctggtctaacctcgtggacagtacattaagtggtactgtgaacactatggagaag
aagtcaaccctgaccatgaaggttggtgctgagacggacggatcttaccggtgtactgtg
acatgtgataacgcaccagtagagaagcgcttccatatcgtggtctactcgttgcccagt
gatcctattctacatatctcctctcttgtggttggacagcagtcacacatcacctgcatc
ttccccaacatctacccctatgagaggatgggtgctgagatcctcctggatgataaagtt
gtggttacgtttgactctgcaaagatcgatttgaatatatatgagatgcaaaacatcagc
ctcacccatgatataaccctggtggaagagatggacaagaaagaggttaaatgtctggct
ctactggaattcccagattatgctattgaccccatagaaagacatacagcacagaacctc
attctaatgtatcctccagaattaccccaaatcacagttctgacatccacaaatgtaaaa
gctggtgaagaaattcatctactatgttcatctgacagtaaatcccaggctgttgtccaa
tgggtgaagatgatggaggatgaagagcttgaaatgtcatctgatgatcaaggggctttg
atactttcaaatgcagtaccagaaaatagcggggtctacatctgttatgccaaaaatatc
gctggaaaaacagcttcacaggtggagatcaatgtgcaaggtctaccggaaaagcctgtg
ctcttcttgaatccaggaacaaaagtagaagctgggcaatctgttattattgaatgcctt
gtaaacagcaatataaaggttacgttgtggaagatgtcagaagatagagatattcttatt
ttcttagactcaacggggaaaaccataatagatgaggccgatccaatagacactgctgta
tacaaatgcatagctgaaaatcagtatggtgtaagcgaaacttcagaatccctcacagtg
gaatatccgccaagggaaactcttctttcatcttcacccactgatgtaaatgaaggagac
acggttactctgacttgtgtttctaagggagtccccacgccgagcatctccatttacaaa
cttctaacatcaggggagagtgtgctcctttctaaagatccagtggttaccttatctgaa
gtgaccagtggaatttaccagtgccaagctaataacagattagggagtgacaaagacaag
ttggagctaattgtgcaagctcccccaaaaaacacacgtataattattactccatcacac
acggtgagaaaaggagacagtgtacatatccaatgcatatcagaatcttctcctgcccct
aaactggtgctgaggatggaaaccgagctgggcatcattgggttggaatctgagcatggg
cagtacagtatttcacatgctgcagtagagcatacagggacttacatatgtgaatcatcc
aatgtaataggacaacaaattgcagaggccaatctgactgtacaagctccaccccaaaat
actcaaatattcataactccatcctctgtggtaagagaaggagataacgtacagatcagg
tgcacttctgaagcacttcctgctcctagactggccctaaagatgaaaatggaacacgac
gtggttgatctggagtctgtaggggcggaatacaacatttcaaatgctgaagtaaggcat
acaggaacgtatatctgtgaatctacaaacgcggctggaagtgagattgtagagaccact
cttaatgtagaagttccacctagaaacacctatatcaccatcattccatcgccagttgtg
agagaaggagactcagtacagatttggtgctcttcagacggttctccagaccctagcctt
gtcctgaagatgaaaacagaatttgaattaattatgctggaattatttgatggctcttat
aacattactcatgcaggaatggagaacacaggaacatacatctgtgaatccaccaacagg
gtgggaaatcatgttgccgagactactttgactgtacaaattccaccacgaaacaccaca
gtggttgtgactccatcacagaacatcaaagaaggtgatacagtcactatcacttgtgag
acccacagcatcccatctccaaccatcattctacagaaagtgtgtgccaagaacaacaca
ttgcttcagaccaacaatggcacctttacattgcacaatgtcaccctcaatgacactgga
acatacacgctccaaataattagcagtgctggaaatgaaacagaggtcatcaatattcaa
gtgcaagaacgacaacagagtccaagattcaaccccacttccatatttatctttggatca
gtggctttcgtgtctctaggtgctattgcatccatcatttaccatctcaagaagtcaaag
ctacaaggatcatacagtcttgtaaaagctttgagaagcaaagtgtga
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