Bufo bufo (common toad): 120986735
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Entry
120986735 CDS
T07950
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03020
RNA polymerase
bbuf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120986735 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
120986735 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbuf03021
]
120986735 (POLR2A)
03400 DNA repair and recombination proteins [BR:
bbuf03400
]
120986735 (POLR2A)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120986735 (POLR2A)
Transcription machinery [BR:
bbuf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
120986735 (POLR2A)
DNA repair and recombination proteins [BR:
bbuf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120986735 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
120986735
NCBI-ProteinID:
XP_040271381
LinkDB
All DBs
Position
1:842690318..842710117
Genome browser
AA seq
1968 aa
AA seq
DB search
MHGPPAGDSACPLRTIKRVQFGVIGPDELKRMSVTEGGIKYSETTEGGRPKLGGLMDPRQ
GVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVDAN
NPKIKDILIKSKGQPKKRLTHVYELCKGKNICEGGEEMDNKFGMDQNEGDEDIQKEKGHG
GCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRITDEECFILGMEPRY
ARPEWLIVTVLPVPPLCVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAHV
IAEDVKLLQFHVATMIDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFS
ARTVITPDPNLSIDQVGVPRSIAANMTFPEIVTPFNIDRLQELVRRGNSQYPGAKYIIRD
NGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTF
RLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTL
TAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIVPGHINC
IRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGH
DITRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHN
NELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINIS
QVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGEGVE
FQNLATLKPSNKAFEKKFKFDYANERALRRTLQEDVVKDILSNAHIQNELEKEFEKMKED
REVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINTRMPSDLHPIKVVDGAKELSKKLVI
VNGDDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSSEAFDWLLGEIESKFNQAIAH
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVF
LLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVAEDQEWVNVYYEMPDF
DVTRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIM
NSEENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIII
TEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALEREL
YHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEA
AAHGETDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKFGMEIPTNIPGLGAAGPTGMF
FGTAPSPMGGMSPAMTPWNQGATPAYGAWSPSLGSGMTPGAAGFSPSASSDASGFSPGYS
PAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSY
SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP
SYSPSSPRYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSP
TSPKYSPTSPKYTPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPK
YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggccgccggccggagacagcgcctgtccgctccgtaccatcaagcgggtacag
ttcggtgtgataggcccggacgagctgaaacggatgtcggtcacggagggcggaataaag
tattcggagaccacagaaggtggtcgtcccaagttgggtggcctgatggaccctcggcag
ggtgtgattgagcgcactggacgctgtcagacgtgtgcaggtaacatgacggagtgcccg
ggccactttggtcacattgaattggctaagccagtcttccatgtgggatttctggtgaag
accatgaaggttcttcgctgtgtctgcttcttctgctccaagttactggtggacgcgaac
aacccaaaaatcaaagacattctgataaaatctaaagggcagcctaagaagcgcctgacc
cacgtctatgaactgtgtaaggggaagaacatctgtgaagggggcgaggagatggacaac
aagtttgggatggatcagaatgaaggggatgaggacattcagaaggagaagggtcatggt
ggatgtggtcggtaccagcctagaatcagacgttctggacttgagctctatgcagagtgg
aagcacgtgaatgaggactctcaggaaaagaagattctgctgagtcctgagcgggttcat
gagatattcaagcgcatcacagatgaggagtgcttcatccttgggatggagccgcgatat
gctcgccccgaatggttaattgtcacggttctgccggttcctcctctgtgtgtgcggcct
gcagttgttatgcaggggtcggcaaggaaccaggatgatctgacccacaaactggccgat
attgtcaaaatcaacaaccagctgaggcggaatgagcagaacggcgcggccgcccatgtc
attgcggaggatgtcaagcttctacaattccatgttgctaccatgatagacaacgagctg
cctggacttcctagggccatgcagaagtccggacgcccccttaagtctcttaagcagcga
ttgaaagggaaggaaggaagagtccgaggaaacttgatggggaaacgtgtagatttctct
gctcggacagttatcactccagatccaaacctttccattgaccaagttggagtcccaagg
tcgattgctgcaaatatgacctttccggagatagttactccgttcaacattgatcggctg
caggagcttgtgagacggggaaacagtcagtatcctggggccaaatacataattcgagat
aatggagatcgcattgacttaagattccacccgaagcccagtgacttgcatttacagatt
ggctataaggtggagagacacatgtgtgatggagacatagtcatctttaacagacagccc
acgctgcacaaaatgtccatgatggggcacagagttcgcattctgccgtggtccaccttc
cgactgaacctcagtgtcaccactccctacaacgctgactttgatggggacgagatgaat
ttgcatcttccacagtctctggagacgcgggctgagattcaggagctcgctatggtccct
cgtatgattgtcacaccgcagtccaacaggccggttatgggcattgtgcaggacacgctg
actgcggtgcggaaattcacaaaaagagatgttttcttggagaggggagaagttatgaat
ttgctgatgtttctctccacatgggacgggaaggtcccccaaccggccatcctgaagcct
cgtcctctctggacaggaaagcagattttctctttgatcgttcctgggcacattaattgt
atccgaactcacagcacccatccggatgacgaagacagtgggccctacaaacacatctcc
ccgggggacaccaaggtcattgtagagaatggagagttgattatgggaatcttgtgcaag
aagtcgctgggcacgtcggcaggatcgttggtgcacatttcatacctggagatgggtcat
gatatcactcgtctcttctactccaatatccagaccgtcatcaataactggctccttata
gagggtcacactattggaattggagactctattgctgatgcaaagacttaccaggatatt
cagaacaccatcaaaaaagccaagcaagatgtaatcgaggtcattgaaaaggctcataac
aacgagctggagcccacccctggaaacaccttgcgtcagacattcgagaaccaagtgaac
agaatcctcaatgatgccagagataaaaccggctcctctgcccagaagtctttgtcagag
tataacaacttcaagtctatggtggtgtcgggagccaaggggtccaagatcaacatctcc
caggttattgctgttgtcgggcagcagaacgttgaaggtaaacgcatcccctttggtttc
aaacatcgaacgctcccccacttcatcaaggatgactatggccccgagagcagaggcttt
gtggagaactcttaccttgccggcctcactcccacagagttcttttttcacgctatggga
gggcgagagggtctgattgatacggctgtgaaaactgctgagactggttacatccagaga
cgtttgattaagtctatggagtctgtgatggtgaagtatgatgccacagtacgtaattcc
ataaatcaggtggtacagctgaggtatggcgaggacggcttggctggagaaggggtagag
ttccagaatctggccactttgaaaccatcgaacaaagcctttgagaaaaagtttaagttt
gactacgccaacgagcgagctctgagaagaactctacaggaggatgttgtgaaggatatc
ctctccaatgcgcacattcagaatgagctggagaaggagtttgagaagatgaaggaagac
cgagaggttctgagagtcattttccccaccggtgacagtaaggtggttctgccgtgtaac
ctcctccggatgatctggaatgcacagaagatattccacattaacacccgcatgccctca
gatctgcatcccattaaagtggttgacggtgccaaggagctcagtaaaaagctggtgatt
gtcaacggagacgatcctttgagtcgccaagcgcaggagaatgccaccctcttgttcaac
atccacctgcgctcaaccctgtgcagccggaggatggtggaggaattcaggctcagttct
gaggcgtttgactggctgctaggagaaatcgagtccaaattcaaccaggctattgctcac
ccgggagagatggttggagcactggccgctcagtctcttggagagccagccacgcagatg
accttgaacactttccactatgctggtgtctcagctaagaatgtcactctgggagtccct
cgtctaaaggagttgatcaacatttccaagaaaccaaagactccttcactgactgtcttc
ttgctgggacagtctgctcgagatgctgaaagggcaaaggatattttgtgccgcttggaa
cacacaacactgcggaaagttacagccaacacggcgatttactatgaccccaacccccag
aatactgtggtggcagaagaccaggagtgggtgaacgtctactacgagatgccagacttt
gatgtcaccagaatttccccatggctgcttcgtgtagaacttgaccgtaaacacatgact
gataggaaactgaccatggagcagatagcagagaagatcaacgctggctttggagatgat
ctgaactgcatatttaatgacgataatgctgagaagctggttctgagaatacgcatcatg
aacagtgaggagaacaaaatgcaagaggaagaagaggtggttgacaaaatggacgatgat
gttttcctacgttgtattgagtccaatatgctaacagacatgaccctgcaagggattgag
cagatcagcaaggtctacatgcacttacctcagacagataacaaaaagaagatcattata
acagaggatggcgagttcaaggctcttcaggaatggatccttgagacagatggagtcagc
ctgatgcgagttttgagtgaaaaagatgtcgaccctgtgaggactacatccaatgacatt
gtagaaatcttcactgttctggggatagaagccgtccggaaagccctggagagagaactg
tatcacgtcatctcctttgacggttcttatgtcaactatcgccacttggcccttctgtgt
gacacaatgacctgtaggggccacttgatggcgatcacccgtcacggtgttaaccggcag
gacactggaccactcatgaaatgttcctttgaagaaacggtggatgtcctcatggaggcc
gcagcgcacggtgagacggatcccatgaagggagtgtctgagaacatcatgctgggccag
ttggctcctgctggcactggctgctttgatctcttattggatgcagagaaatgtaaattt
ggaatggaaattcctacaaatatcccaggacttggagctgcgggaccaactggaatgttt
tttggaactgccccgagccctatgggtggaatgtctcctgctatgactccatggaaccaa
ggtgctaccccagcctacggagcctggtccccaagtctaggaagcggcatgacccctgga
gctgctggcttttctcccagtgcatcctctgatgctagtgggttcagtccaggctattct
cctgcttggtctcctacaccaggttctcctggctctcctggtccctcaagtccatacatt
ccttctccaggtggtgccatgtctccaagttattcccccacctctccagcttatgaacca
aggagtcctggaggctatacgccacaaagtccaagctactctccgacttcaccttcttac
agtccaacatccccttcatattctcccacaagtcctaattatagtcccacctccccaagc
tactctcccacctccccaagctactccccaacaagtccaagttactcaccaacctctccc
agttatagcccaaccagtcccagttactctcccacgtctccaagctactctcccacatcc
ccaagctactctcccacatccccaagctactctcctacaagtcccagctacagtccaacc
tctccaagttactctcccacttctcccagttattctcccacaagtcccagttactcaccc
acatctcccagctattcccctacttcaccctcatacagcccaacgtcaccatcttattca
cctacatccccatcctacagcccgacatctccctcctattcacctacttctcccaactat
tccccgacctctcctaactataccccaacctcacccagttacagtcccacttctcccagc
tatagtcctacttctccaaattatagccctacaagcccgagttattcacccacatccccc
agttactctccttcaagtccgcgttacacaccgcagtctccaagctatactcccagctct
cccagctacagccccagttctcctagctactctccaacaagccccaaatatacaccaacc
agcccgtcatacagtccaagctctccagagtacacgcctacgtcgcccaagtactctcct
acctcccccaagtactcgcctacttcgcctaagtacacgccaacttcccctacttattct
ccaacaacccctaaatactcccctacatcccctacctattcgcctacttctccagtgtat
actcctacttcccccaagtactctcctacatcgcctacatattcaccaacctctcccaag
tattctccaacttctccaacctactcgccaacaagccccaaaggttccacgtattctcca
acatcaccgggatatagccccacatctccgacttacagtctgacgagtccggctatcagt
ccagatgacagcgatgaagagaactga
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integrated database retrieval system
