Bufo bufo (common toad): 120990427
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Entry
120990427 CDS
T07950
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120990427 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbuf03021
]
120990427 (POLR1A)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120990427 (POLR1A)
Transcription machinery [BR:
bbuf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120990427 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
Motif
Other DBs
NCBI-GeneID:
120990427
NCBI-ProteinID:
XP_040275190
LinkDB
All DBs
Position
2:complement(793903962..794004220)
Genome browser
AA seq
1709 aa
AA seq
DB search
MLFSKDVPWRRLQRISFAVYSSEEIRMLSVKAITNPQYLDPAGNPMVNGLYDLALGPPDN
KEFCATCSQDFMSCPGHLGHIELPLAVYNPLLFDKLYLLVRGSCFRCHLLTCPRSTIHLL
LNQLKLLDRGALQEMYEVEAVLSRFLEGNVGVSGNEIQEELETYTKKVLKAYPKKRDVSC
VKNICLARNKLLSDFWKTQMASKKCPHCKAPRSIVRKEHNSKLTIMMSSKKTDDEVSEIK
DTGELTQRGYLTPSTTKEHIDALWENEGFFLQCLFSGMTIGDDFSLDMFFLDLVVVPPSR
FRPINRMADQMYTNGQTVNLQAVLKDVTIIQKLLAVMAEEQMKTPNGTETEVIEDSTNPV
QIVDRSFLVALHGRSLTDKLYNAWVRLQGHVNIVFDSEMDKLMTDKYPGIRQLLEKKEGL
FRKHMMGKRVDYAARSVICPDMYISTNEIGIPMVFATKLTYPQPVTTWNVQELRQAVING
PNVHPGASMVVCEDGSRTILTSSLPQREAIAKQLLTPSTGSQKLTSKIVYRHVKNGDVLL
LNRQPTLHRPSIQAHKARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAY
TLACTDEQYLVPKDGTPLAGLIQDHMVSGASMTIRGCFFTRDQYMELVYRGLTDKKGRVK
TLPPAIMKPCRLWTGKQVVSTLLINVIPDHYIPLNLTGKAKIDQKAWVKETPRPIPGFAS
DSMCESKVIIRDGELLCGVLDKAHYGSSSFGLVHCCYELYGGETSGKLLTCLARLFTAYL
QLYRGFTMGVEDILVRPYADAARQKIVESSTLCGGKAIRAAFNLSQLASDEEAKEKWENA
HLSKDQRDFNMVDLKFKEEVNLVSNEINKVCMPLGLHRRFPENNLQLMVQSGAKGSTVNT
MQISCLLGQIELEGRRPPLMPSGKSLPCFQPYDFAPRSGGFVTGRFLTGIKPPEFYYHCM
AGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDVPKT
QFLQPNQFPFIAENYEVIRQLKRLDEVLCKMDSEQANRYRQAIRKWRDKHAGSSQRLGAF
LLYSQKKLAAFKEHIPEGLSEYGREEAITQLIDSWRALDPKLQRKYIKRSPRLPDPCLSV
LRPDLYFGSVSESFQDKVDRYIEQRETRGDSSYGKSKVPSDSLRTLLQLKWQRALCDPGD
AVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILLIASSNIKTPMMSVPVL
PTKKATRRVRKLKKQLTRVCLGEVLHKLDVEETFRVEEKYQKFHVYKIKFLFLPYEYYRQ
EKCLRPEDVLRIMETRFFRIMLEAIKRRSAKLASYRDVTSRKASRKDVDDEGGEGAATQE
NQEAEAEEQDIVDADAEEGDADATDAMRKKKQEEEVDYESGEEEGEEQEGAENGEEQEGA
ENGEEQDEENAPAEKKVESEEDEEDRSPSPSSIERETETNITENVLSEDRVNAVLDLNPS
VEDYSYDSERSLWCQITLKLPLMKVHFDISSLISSLAQNVVIHETRGISRCLLNDTTNHR
GEKELILNTEGINLQEMFKYSDILNLRRLYTNDIHAMANTYGIEAALRVVQKEIKDVFAV
YGIEVDPRHLSLVADYMCFEGTYRPLNRYGIQSSSSPFQQMTFETSFKFLKDATMSGAKD
HLQSPSACLVVGKVVKGGTGLFDLKQPMK
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctccaaggatgtgccatggcggcgcctgcagcgcatctcattcgccgtttac
tcttcagaggagatcaggatgctgagtgtgaaagccatcaccaatccccagtacctggac
ccggcgggcaatcctatggtgaacggcctgtatgacctggccctgggcccgccagacaac
aaagaattttgcgccacctgctctcaggacttcatgagctgccccggacacctgggccac
atcgagctgcctctcgctgtctataatcccctgctctttgataaactgtacctccttgtg
cgaggctcctgcttccgctgtcacctgctgacatgtcctcgctccaccatccatctgctg
cttaaccagctgaagttactggaccgaggagccctccaggagatgtacgaagtagaggcc
gtcctcagccggttcttagaagggaacgttggagtcagcggtaacgagattcaggaggaa
ttggaaacctacaccaagaaagtgctgaaagcctacccgaagaagcgggacgtatcctgt
gtgaagaatatctgtttggccaggaacaagctcttaagtgacttctggaaaacgcaaatg
gcttccaagaaatgtcctcattgcaaggcaccgcgctccatagtacgaaaagagcacaac
agcaagctgaccatcatgatgagctccaagaaaacggacgacgaagtctcagaaattaag
gacaccggcgagctcacacagcgaggctacctgacccccagcactactaaggagcacata
gacgcattgtgggaaaatgaaggtttcttcctccagtgcctgttttctggcatgacgatc
ggcgacgacttctccctggacatgttcttccttgatcttgtagtggttcctccatctcgt
ttccgcccgatcaatcgcatggcagatcagatgtacaccaacgggcagacggttaacctc
caggccgtcctcaaagatgtgaccatcatacagaagttgctggcggtgatggccgaggag
caaatgaagactccaaatggtacagagacagaagtcatcgaggacagcacgaaccctgtg
caaatcgtcgatcgatccttcttggtggcgctgcatggccgaagtctcacagataaactt
tataacgcttgggttcgcttacaagggcacgtaaacatcgtgtttgatagcgagatggac
aaactgatgactgacaagtatcctggaatccgtcagctactggagaagaaggaaggtcta
tttcggaaacacatgatgggaaaacgtgtggactacgcagctcggtctgttatttgccct
gatatgtacatcagtactaatgagattggcatcccaatggtatttgccaccaagttgacc
tatccccagcctgtcacaacgtggaacgtgcaggagttaaggcaggcggtcatcaacgga
cccaatgtgcatcccggggcctccatggtggtttgtgaagatgggtctcgcacaatattg
acctctagtcttccacagcgggaagccattgccaagcagctgctcacgccatccaccggt
tcacagaagttgacttcgaaaattgtttatcgtcacgtcaagaatggcgatgtcctgcta
ctcaaccggcagcccacactgcacagaccgtccatccaagctcacaaggctcgaatcctc
ccaggagagaaagtgctgcgacttcactacgccaactgcaaggcctataatgccgacttt
gacggagacgaaatgaacgctcattttcctcaaagtgaacttggtcgagctgaggcctac
accctagcgtgtaccgacgagcagtatttagtgcccaaggatggcactcccttagccgga
ctcatccaagatcacatggtgtctggagccagcatgaccatccgtggttgcttctttacc
agagatcagtacatggagctggtatacagaggtctgactgataagaagggccgggtgaaa
acccttccacctgcaattatgaaaccctgcagactatggactggaaaacaggtggtctct
acgttactgatcaacgtcatcccagatcactatatacctctcaacctgacgggaaaagca
aagatcgatcagaaagcgtgggtgaaggagaccccccggcccatccctggttttgcctca
gattctatgtgcgagtcgaaggtcatcatacgagatggagagctgctctgcggggtgctg
gataaagcgcattatggcagctcctccttcggtcttgtccactgctgctatgagctctat
ggtggtgagaccagcgggaaattgctgacctgcctagcccgcctcttcacagcctacctg
cagctctaccggggcttcaccatgggggtggaggacattctggttcgaccttacgctgat
gcggccagacagaagatcgtggaaagctccacactttgtggtgggaaggcgatccgagca
gctttcaacctctctcagctggcctccgatgaggaggctaaggagaaatgggagaacgcc
catctaagtaaagaccagagggacttcaacatggttgacttgaagttcaaggaggaagtg
aatctagtgagcaatgagataaacaaggtgtgtatgccgcttggtctccacagacggttc
ccagagaataatttgcagctgatggtccagtctggagctaaaggatccactgtcaacacc
atgcagatctcttgccttttgggtcaaattgaattggaaggtcggcggccaccactgatg
ccttctgggaaatccctaccttgttttcaaccctatgattttgcaccacgatccggcggc
tttgtgactggacgcttcctcaccggcatcaaacccccggagttctactatcactgtatg
gcggggagagaaggtctggtggacactgctgtgaagacaagtcgttcgggttatctccag
aggtgcatcatcaagcatctcgaggggctggtggttcagtatgacctcacagtgcgtgat
agcgacggcagcgtggtgcagttcctgtacggcgaagacggactggacgtgcccaagacg
cagtttctgcagccgaatcagtttccgtttattgctgagaactacgaggtgatcagacag
ttgaaacgcttggatgaagtcttgtgtaaaatggattctgagcaggctaaccgctaccgc
caggctatccggaagtggagagacaaacatgctggttcttcccaaaggcttggggcattc
ctcttgtactcccaaaagaagctggcggcttttaaagagcacatacctgagggactgagt
gaatatggacgggaagaggccattactcagctgattgatagttggcgtgccctggaccca
aagctgcagaggaagtacataaaacggtcccctcgcctgcccgacccttgcctctcagtc
ctccgtccagatctttattttggatccgtgtctgaaagttttcaagacaaagtcgatcgg
tacatcgagcagcgggaaacgcggggcgactccagctacggcaagtccaaagtgccatct
gacagtttaaggactttgctgcagctgaaatggcagagagccctgtgtgaccccggggat
gcggtgggccttcttgcagctcaaagcatcggagaaccctccacccagatgacactgaac
accttccactttgcaggcagaggagagatgaacgtcactctaggtatccccagactcaga
gaaattttattgattgcaagctccaatattaaaactcccatgatgagcgtgcccgtcctg
cccactaagaaagctacgagaagagtaagaaaactgaagaagcaactgacccgtgtgtgt
ctgggtgaggtattgcacaagctggatgtagaagaaaccttccgcgttgaagagaaatac
cagaaatttcacgtctacaaaataaaattcctcttcttgccatatgaatattatcggcag
gagaaatgcttgagacctgaggatgtgctacgcattatggagaccaggttcttccgaatt
atgttagaagccatcaaaaggagaagtgcaaaacttgcctcttacagggatgtaaccagc
agaaaggcgtctcgaaaagatgtggatgatgaaggcggggaaggagcagcaacgcaggag
aaccaagaagccgaggctgaagaacaagacattgtggacgctgatgccgaggagggtgat
gccgatgccacagatgcaatgcggaaaaaaaagcaagaggaagaggtcgattatgaaagt
ggagaggaagagggagaggagcaggagggagcggagaatggagaggagcaggagggagcg
gagaatggagaggagcaggatgaggagaatgctcccgctgagaaaaaggttgagagtgag
gaggatgaagaagatcgcagtccctcgccttcctccattgagagagaaaccgaaacaaac
ataacggagaacgtgttgtcagaggaccgggtgaacgctgtcctggatctcaatcccagc
gtcgaagactattcctatgactcagaaagaagcttgtggtgtcagatcacgctgaagctg
ccgctcatgaaggtccacttcgatatctcctctctcatctcgtccctggcacaaaatgtc
gtgatccacgagaccagaggaataagccgctgtctcctcaacgataccactaaccataga
ggagagaaggagctgattctgaacacagagggcatcaatctccaggagatgtttaaatat
tcagatatcctgaacctgagacgcctgtataccaatgatatccatgcgatggccaacacg
tacggcatagaggctgcgctgagggtggtgcagaaagaaattaaagatgtgtttgctgta
tacggtattgaggtagacccccgacacctgtccctggtagcagactacatgtgctttgag
ggaacttatcggcctctcaaccgctacgggattcagtccagctcttcccctttccaacaa
atgacctttgagaccagcttcaagttcttgaaggatgctacaatgagtggtgccaaggac
catcttcagtctccgtccgcatgtctggtggttgggaaagttgtaaaaggaggcactgga
ttgtttgacctcaagcagccaatgaaataa
DBGET
integrated database retrieval system
