Bufo bufo (common toad): 120998799
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Entry
120998799 CDS
T07950
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120998799 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbuf03021
]
120998799 (POLR1B)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120998799 (POLR1B)
Transcription machinery [BR:
bbuf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120998799 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
120998799
NCBI-ProteinID:
XP_040285570
LinkDB
All DBs
Position
4:503584128..503605447
Genome browser
AA seq
1135 aa
AA seq
DB search
MDAAQKWHELPTQPSLKKLTDPSYGKPGSKQHPPLQDLTRAHIESFNEAMTEGLYQAVQA
MKPLEFTYKGDRLSFAIVDAVISQPMVPKGSLCREPKIYPAECRGRRCTYRGKLTVDVSW
SVNGIQKGVIKQFLGYVPVMVKSKLCNLYGLSPRQLIEHHEEEQEMGGYFIINGIEKVIR
MLIMPRRNFPLVMNRPKWKNRGPGYTQYGISMRCVRDEHTAVNMNLHYLENGSVMVNFIY
HKQLFFIPLGFALKALVSFSDFQIFNELIKGKEDNSFYRDCITQMLRVVMDEECRTQKQV
LKYLGERFRVKFWLPEWYTDEQVGEFLLEQCICIHLKTNLEKFYMLCYVTRKLFAFAKEE
CMEENPDSLMNHEVLTPGQLFLMFLKEKMEVWLLGAKLTLEKKSQKSVLSLSTENMMRIF
SSTTDITAPCEYMLATGNMRSKTGLGILQSTGLCVVADKLNFVRYLSHFRCVHRGASFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHMTVMCEIVTQTSINSRLLVLLCTLGIT
PVDGIPGKPFTDCYQVILDGALVGWVEKDLAPNLVNTLRSFKVTQERKIPPWTEIVLIPI
TGKASLYPGLYIFTTPCRMVRPVRNLATGKEELIGPFEQVFLNVAIYEGDIVPGVTTHQE
LFPHNLMSVVANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTFQDRADNKLYRLQTPQSP
LVRPTMYDYFDMDNYPIGTNAIVAVISYTGYDMEDAMILNKASWERGFAHGSVYKTDFVD
LSTKVKSGDDSFVFGIKVDDERVKGKLDSDGLPPVGAVLQFGDPYYCYLNENTGENFVVF
YKDKESCVIDNIKACSNDLGIGKFKAVCITMRIPRNPTIGDKFASRHGQKGILSRLWPSE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALE
YFGEMLKAAGYNYYGTEKLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDR
VTNQPVGGRNIQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSEAHVCVTCGSLLSPF
LEKPPPSWSAMRNRKHYCSLCGCSDSVDVISVPYVFRYFVAELAAMNINVKLSVR
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggcccagaagtggcacgagctgcccacccagcctagtctgaagaagctgacg
gatcccagctatgggaagcccgggagtaagcagcaccctcccctgcaggacctgaccaga
gcccacatcgagtcattcaatgaggccatgacagaggggctgtaccaggcagttcaggcc
atgaagccgctagaatttacttataaaggtgaccgtctgtcattcgccattgtggacgca
gtcatcagtcagcccatggtcccaaaaggaagtctctgcagagagcccaaaatttatccc
gcagaatgccgagggcgaaggtgtacgtaccgtggaaagttgactgtggatgttagttgg
tcggtcaacggcattcaaaaaggtgtcatcaagcagttccttggctacgtccccgtcatg
gtaaaatccaaactctgtaacttgtatggcctgtccccccggcagctcattgagcatcat
gaagaggaacaggaaatgggcggctacttcataataaatggaatcgaaaaagtcattagg
atgctcattatgccaagaaggaattttcctcttgttatgaatcgccccaaatggaaaaac
cgaggcccaggctatacccagtatggtatctcaatgcgttgtgtccgagacgagcacacc
gctgtgaacatgaatctacattacctggaaaatggttctgtaatggttaatttcatttat
cacaagcagctcttcttcatccccctaggctttgctttgaaggcattggttagtttttca
gactttcagattttcaatgagctgatcaaggggaaagaggacaattccttctatagagac
tgcatcacccagatgctacgagtcgtgatggatgaggagtgtcggacccaaaaacaagtt
ctcaaatatctaggggagcgtttccgagtcaagttttggctcccagagtggtatacagat
gagcaagtgggagagtttcttctagaacagtgcatttgcatacaccttaaaaccaacctg
gagaaattctatatgctctgctatgtgacaaggaaactttttgcttttgccaaagaagag
tgcatggaggagaatcctgacagtctaatgaatcatgaggttctgactccaggacagctg
ttccttatgtttttaaaggaaaagatggaggtctggctgttaggggccaaacttacctta
gagaagaaatcacaaaagtccgtcttgtccctgagcaccgaaaacatgatgagaattttc
agtagcaccacagatatcacagcgccatgtgaatacatgctagctactggaaacatgcgg
tccaaaactggtcttggcatcctgcagtctacaggtctgtgtgtagttgccgacaagttg
aattttgtccgttacctttctcacttccgctgtgtgcacagaggggcttcctttgccaag
atgaggaccactactgtccgtcgtcttctgccagagtcctggggtttcctgtgcccagtg
cacactcccgacggcgaaccctgtggtcttatgaatcacatgactgtgatgtgcgagatt
gtgacacagacttccatcaattctcgtctgctggttctgctttgcacgctaggtatcact
ccggtggatggaatacctggaaaaccttttacagattgctaccaggtcatcttggatggt
gctttggtgggctgggtggagaaagatttggctccaaatctggtgaacacgcttcggagc
tttaaggtaacacaggaaaggaagatcccaccctggacagagatagtcctcattccaatt
actggaaaagcaagtctttatcctgggctttatatttttactaccccctgcaggatggtt
cgtcctgttaggaacttggctacagggaaagaagagctgatcggtccatttgagcaggtt
ttcctaaatgtggcaatatatgagggtgacattgtgcctggagtcaccacacaccaggag
ctctttccgcacaacttgatgagtgtcgtggccaacttcattcctttctctgatcacaac
cagagtcccaggaacatgtaccagtgccagatgggtaaacagactatgggattccctctt
ctaacctttcaagatcgcgctgacaacaaactgtatcgcctccaaaccccccagagtcct
cttgtgcgtcccaccatgtatgattattttgatatggataactatccaattggaacaaat
gctattgtggctgtcatttcatacaccggatatgatatggaggatgctatgattttgaat
aaagcttcgtgggagaggggatttgctcatggaagtgtttacaaaactgattttgtagac
ctgtcgactaaagttaaaagcggagacgacagttttgtgtttggaatcaaagtggacgat
gaacgggtaaagggaaaacttgactctgatggtctgcccccggtgggtgctgtcctgcag
tttggagacccctactattgctatctgaatgagaacactggagagaactttgttgtgttt
tacaaggataaagagagctgcgtcattgacaacataaaagcttgcagcaatgatctgggc
attggaaaattcaaggcagtgtgcatcactatgaggatcccacgtaaccccaccataggt
gataaatttgctagtcgacatggacagaaaggcattctcagcaggctgtggccatcagag
gatatgccattcacggaatccgggatggttcctgacatcttgtttaacccacatggtttc
ccatctagaatgaccattgggatgttgattgagagcatggctggtaaatcggcagccctg
catggtttgtgccatgacgccactccattcacattctctgaagaaaactctgctctggaa
tattttggtgaaatgctgaaggcggccgggtataactactacggcacagagaaattgtac
agtggtattagtgggctcgagcttgaggcggatatttttatcggtgtggtctactaccag
cgtctgcgtcacatggtttctgacaagttccaagtcaggacaacgggggcgcgtgacaga
gtgaccaaccagcctgtgggtggcaggaacatacaaggaggtattcgttttggagagatg
gaacgggatgcccttctggcacatgggacgtctttccttcttcatgacagactttttaac
tgttctgatagatcagaggcccatgtgtgtgtaacctgcggcagccttctatcccctttc
ctggagaagcctccaccttcctggtcagcaatgcggaaccgcaaacactactgctcactc
tgcggctgttcagattcagttgacgttatctctgtgccttatgttttccggtactttgtg
gcggagttggcagccatgaacatcaatgttaagctgtctgtgcgctaa
DBGET
integrated database retrieval system
