Bergeyella cardium: DBX24_08960
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Entry
DBX24_08960 CDS
T06387
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bcad
Bergeyella cardium
Brite
KEGG Orthology (KO) [BR:
bcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcad03009
]
DBX24_08960 (rimO)
Enzymes [BR:
bcad01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DBX24_08960 (rimO)
Ribosome biogenesis [BR:
bcad03009
]
Prokaryotic type
ribosomal protein modification factors
DBX24_08960 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
TMF_TATA_bd
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QHN66003
UniProt:
A0A6P1QYC8
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All DBs
Position
1963514..1964818
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AA seq
434 aa
AA seq
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MRTKSVGRKKINIVTLGCSKNLYDSEVLMGQLKASGKEVSHEAKNGDIIVINTCGFVDVA
KEESVNTILDYIEAKKRGDVEKVFVMGCLSERYKPDLQKEIPDVDEYFGTKDLPILLKHL
GADYKHELVGERMTTTPKHYAYLKISEGCDRPCSFCAIPLMRGNHISVPIEKLVLEAKKL
AQKGTKELILIAQDLTYYGLDIYNKRALADLLKELVKVEGIEWIRLHYAFPTGFPEDVLE
IIKNEPKVCNYIDIPLQHINTEILKSMKRGTTREKTNTLLNKFREKVPDMAVRTTLIVGY
PGETEEAFQELKEWVKEQRFDRLGCFTYSHEENTTAFDLQDDVPQEVKEARVSEIMELQS
SISWEKNQEKVGKVFRCIFDRKEGNYFVGRTEYDSPDVDNTVLVSAENLYLPIGEFADIR
ITSAEEFDLYGELA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatctgtcggcagaaagaagattaatatcgtaaccttaggttgttcaaaa
aatttatatgactctgaagtgctaatgggtcagctgaaagcgagcggaaaggaagtgagc
cacgaggcgaaaaacggtgatattattgtgattaacacctgtggttttgtggatgttgca
aaagaggagtcggtaaatacgatactggattatatagaagcaaaaaaacggggagatgtg
gaaaaagtgtttgtaatgggctgcttatccgagagatataaacccgacttgcagaaagaa
atcccagatgtagatgaatatttcggtacgaaggatcttcccatacttctgaagcacctc
ggcgccgattataaacacgagctcgttggagagcggatgacgaccaccccaaaacattat
gcctacctgaaaatttcggagggctgcgaccggccgtgttctttctgcgcaattcctctg
atgagaggaaaccatatttctgtaccgattgaaaaattggttttagaagcgaagaagctc
gcccaaaaaggaacaaaggaattaatcctcattgcacaggatttgacctattatggactc
gatatttataataaacgagcactcgccgacctgctaaaagagctggtaaaggtagaagga
atagagtggattcgcctgcattatgcattccctacgggatttccagaggatgttctcgaa
attattaagaacgagcctaaggtttgtaattatattgatatcccgcttcagcatattaat
accgaaatcctcaaatcgatgaaaagaggaactactcgcgagaaaaccaatactttatta
aataaattccgcgaaaaagtacccgatatggcagtgcgaacaacacttatcgtaggctat
cctggggagacggaagaggctttccaagagttgaaggaatgggtaaaggaacagcgattt
gaccgccttggatgttttacctactcccatgaggaaaatacaaccgcctttgatttgcag
gatgatgtgcctcaagaggttaaagaagcgagagtctccgaaattatggagctgcaatca
agcatatcttgggaaaaaaatcaagagaaagttggcaaggtattccgatgtatttttgac
cgtaaagaagggaattacttcgtaggacgaacggagtatgactcaccagatgtggataat
acggtattggtatccgcagaaaatctctacctcccaattggagaatttgccgatatccga
attacttcagcagaggaatttgacctctatggcgaattagcataa
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