Bradyrhizobium canariense: BcanWSM471_20695
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Entry
BcanWSM471_20695 CDS
T08760
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bcan
Bradyrhizobium canariense
Brite
KEGG Orthology (KO) [BR:
bcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcan03009
]
BcanWSM471_20695 (rimO)
Enzymes [BR:
bcan01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BcanWSM471_20695 (rimO)
Ribosome biogenesis [BR:
bcan03009
]
Prokaryotic type
ribosomal protein modification factors
BcanWSM471_20695 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UFW38655
LinkDB
All DBs
Position
4487709..4489034
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AA seq
441 aa
AA seq
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MDQTAAPKVSFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQ
ESLSAIGEAMAENGKVIVTGCMGAEPEQIEQAYPGVLSITGPQQYESVLDAVHRALPPAH
NPHLDLVPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRPANDVLREAERLV
GAGVKELLVISQDTSAYGIDLKYAESPWRDRQVRAKFIDLARELGELGAWVRLQYVYPYP
HVDEVIALMNEGKVLPYLDIPFQHASPEVLKAMKRPAAQDKTLARIKRWREQCPDLALRS
TFIVGFPGETDADFAYLLDWLDEAEIDRLGCFKYEPVAGATANAIENPVPEEIKQERYNA
LMARQQKISARRLKRKVGTRQQIIIDEVGPTVSKGRSKADAPEIDGAVYLSSRRPLRVGE
IVTAKIERADQYDLHGSVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggatcagacggctgcgcccaaggtcagcttcgtgtcgctcgggtgccccaaggcattg
gtggattccgagcgcatcatcacgcgtctgcgcgccgagggctacgagctcgcccgcaag
catgacggggctgacatcgtcatcgtcaacacctgcggcttcctcgacagcgccaagcag
gaatcgctctcggccatcggcgaggccatggccgagaacggcaaggtgatcgtaacaggt
tgcatgggcgcggaacccgagcagatcgagcaggcctatcccggcgtgctctctatcacc
ggcccgcagcaatacgagagcgtgctggacgccgtgcatcgcgcgctgccgcccgcccac
aatccgcatctcgatctggtgccgccgcaaggcatcaagctgacgccgcggcactacgcc
tatttgaaaatctccgagggctgcaacaaccgctgcaccttctgcatcattccgaaactg
cgcggcgacctcgtctcgcgaccggccaacgacgtgctgcgtgaggccgagcgcctggtc
ggcgccggcgtcaaggagctgctggtcatctcgcaggacacctcggcctacggcatcgat
ctcaaatacgccgagagcccgtggagggatcgccaggtccgggccaaattcatcgacctc
gcgcgcgagctcggcgaactcggggcctgggtgcggctgcaatatgtctacccctacccg
catgtcgacgaggtcatcgcgctgatgaacgagggcaaggtgctgccctatctcgacatc
ccgttccagcacgcaagccccgaagtgctgaaggcgatgaagcgtccggcggcgcaggac
aagacgctggcgcgcatcaagcgctggcgcgagcaatgtcccgatctcgctttgcgctcg
accttcatcgtcggcttccccggcgaaaccgatgccgatttcgcgtatctgctcgactgg
ctcgacgaagcagagatcgatcggctcggctgcttcaaatacgagccggtcgccggcgcc
accgcgaacgcgatcgagaatcccgtgccggaagagatcaagcaggagcgctacaacgcg
ctgatggcgcgccagcagaagatttccgcgcgcaggctgaagcgcaaggtcggcacgcgg
cagcagatcatcatcgacgaggtcggcccgaccgtctcgaagggccgctccaaggccgat
gcgcccgagatcgacggcgccgtctacctgtcgagccgccgccccttacgcgttggcgag
atcgtcaccgcgaagatcgaacgcgccgaccaatatgacctgcacggcagcgtcgcaggc
ttctga
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