Bacillus carboniphilus: LC087_03030
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Entry
LC087_03030 CDS
T09277
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
bcao
Bacillus carboniphilus
Pathway
bcao00190
Oxidative phosphorylation
bcao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcao00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LC087_03030
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LC087_03030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcao03019
]
LC087_03030
Enzymes [BR:
bcao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LC087_03030
Messenger RNA biogenesis [BR:
bcao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LC087_03030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
WLR43189
LinkDB
All DBs
Position
594994..597102
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AA seq
702 aa
AA seq
DB search
MEKVKKTVNLGLPQFYNNRELSWLAFNKRVLEESIDQRNPLLERMKFLAIFSSNLDEFFM
VRVAGLKDQVKAGFNKPENKAGMTPKQQLTHISENTHELVSLQYKTFTEGLLPELKDENI
EIVSMEDLSEVEKKELEMFFDDQVFPVLTPMAVDAYRPFPILLNKSLNLAILLDDEDEIE
ENRIKTAIVQVPSVLNRFVNVGEKTDGDRFIMLEDVISHFIEKLFYGYRVLSVSEFRITR
NADMTIHEEGARDLLKEIEKELKKRKWGSAIRLEVKSGKFDERVLSYLLEELEIHEKDVY
QINGPLDLTCLFGFYKKLSQTNETLIYETLIPQPPRDLASDEDLFEVVSEKDIFLHHPYE
SFEPVVDFIAEAADDPDVLAIKQTLYRVSGDSPIIEGLKRAAENGKQVTVLVELKARFDE
ENNVQWAKELEKSGCHVIYGMTYLKTHSKITLVVRRRNGKIERFVHLGTGNYNDATAKLY
TDMGIMTSDSKFGIDATNFFNYLSGYTEKPHFHQISVAPFDIRRDFLHLIEREIQFQKQF
QNGRIIAKMNSLTDKHLIMKLYEASCAGVKIDLIVRGICCLKPGVPSVSENIRVRSIVGR
FLEHSRIYYFFHNGEEKMFLSSADLMTRNMEKRVEISFPVYDKHTKNRLKNVFAVQLADN
LKAREQDENGEYHYVKREPGDAEVDCQLVLFGMAYRVLEDEE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagttaagaagacagtcaatttaggtcttcctcaattttataataatcgtgaa
ttaagttggctagcatttaataaacgagtcttagaggagtctattgatcaacgaaatcct
ttattagaaagaatgaaatttttagctatttttagttccaatttggacgagttctttatg
gttcgcgttgcaggcttaaaagaccaagtaaaagcaggcttcaataaacctgagaataaa
gcaggtatgacaccaaagcagcagcttactcatatttcagaaaacacgcatgaactagtc
agtcttcaatataaaacatttactgaaggtttattgccagaattgaaagatgaaaatata
gagattgtatcaatggaggatctttcagaagtagaaaaaaaagagctggaaatgtttttt
gatgatcaagtgttccctgtactcacgccaatggcagtcgacgcttatcggccgtttccc
attttactaaataaaagcttaaacttggctattttgcttgatgatgaggatgagatagag
gaaaatcgcattaaaactgcgattgttcaagtcccatccgttcttaaccggtttgttaat
gtaggtgaaaaaacagatggtgatcgttttataatgttggaggatgtcattagtcatttt
attgaaaaactgttttatggatatagggttttatctgtttccgaatttagaattacaaga
aatgctgatatgacgattcatgaagaaggtgcaagggacctgctgaaggaaatagaaaaa
gagttaaagaaaaggaaatggggatcggccatccgtttagaggtgaaatcaggtaaattt
gatgaacgagtattatcatacttattagaagagcttgagatacatgaaaaagacgtatat
caaattaatggacctttagatttaacttgtttattcggtttttataaaaaactctcgcaa
acaaatgaaacattaatatatgagacgttaattcctcagccaccaagagacttagcatct
gatgaagacttatttgaggtcgtttcagaaaaggatatctttttacatcatccatatgaa
tcctttgaaccggtcgtagactttattgcggaagctgcagatgatccagatgtactggcc
attaagcagacattgtaccgagtaagtggtgattcaccaatcattgaaggattaaaaagg
gcggcggagaatggcaagcaagtaaccgtattagtcgaactcaaagctcgcttcgatgaa
gaaaacaatgtccaatgggcgaaagagctagaaaaatccggctgtcatgttatatatggt
atgacctatttgaaaactcatagtaagattactcttgtcgttagaagacgaaatgggaaa
atcgaacggtttgttcatttaggtactggaaattataatgatgcaactgcaaaactttat
acagatatgggaattatgacatcagactctaagtttgggatagatgctacgaactttttt
aattatttaagtgggtatacagaaaaacctcactttcatcaaatttctgtggctcctttt
gacataagaagagatttcttgcatttaattgaacgtgaaatccagtttcagaaacagttt
caaaatggtcgaatcattgctaaaatgaattcattgactgataagcacttgattatgaaa
ctttatgaggcatcatgtgctggtgttaagattgatttgattgttagaggtatttgttgc
ttgaaacctggagtacctagtgtgagtgaaaatattagagtgagaagtattgttggacgc
tttctagaacatagtcgaatttattacttttttcacaatggggaagagaaaatgttttta
tcttctgctgatttaatgacaagaaacatggaaaagagagtggaaatttcatttcctgtt
tatgataagcatactaaaaaccgtttgaaaaatgtgtttgctgttcaattggcagacaac
ttgaaagcaagggaacaagatgaaaacggtgagtatcattatgtgaaacgtgaaccagga
gacgcagaggttgattgtcaattagttttatttgggatggcttatcgcgttttagaagat
gaggaatga
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