Burkholderia cepacia DDS 7H-2: DM42_774
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Entry
DM42_774 CDS
T03302
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced00540
Lipopolysaccharide biosynthesis
bced01100
Metabolic pathways
bced01250
Biosynthesis of nucleotide sugars
Module
bced_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DM42_774 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bced01005
]
DM42_774 (rfaD)
Enzymes [BR:
bced01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DM42_774 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bced01005
]
Core region
DM42_774 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AIO48525
LinkDB
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Position
1:complement(857512..858504)
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AA seq
330 aa
AA seq
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MTLIVTGAAGFIGANIVKALNERGETRIIAVDNLTRADKFRNLVDCEIDDYLDKTEFVER
FVRGDFGKVRAVFHEGACSDTMETDGRYMMDNNFRYSRAVLDTCLAQGTQFLYASSAAIY
GGSTRFVEERDVEAPLNVYGYSKFLFDQVIRRVLPSAKSQIAGFRYFNVYGPRETHKGRM
ASVAFHNFNQFRAEGKVKLFGEYNGYAPGEQTRDFVSVEDVTKVNLFFFDHPEKSGIFNL
GTGRAQPFNDIASTVVNTLRALDNQPPLTLAQQVEQGLIEYVPFPDALRGKYQCFTQADQ
TKLRAAGYDAPFLTVQEGVDRYVRWLSGRV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcatcgtcaccggcgcagccggttttatcggcgcgaacatcgtcaaggcgctc
aacgagcgcggcgagacgcgcatcatcgcggtcgacaacctgacccgcgcagacaagttt
cgcaatctcgtcgattgcgagatcgacgactatctcgacaagaccgaattcgtcgagcgc
tttgtgcgcggcgatttcggcaaggtacgcgcggtatttcatgaaggcgcctgttcggac
acgatggaaaccgacggccgctacatgatggacaacaacttccgctacagccgcgcggtg
ctcgatacctgcctcgcgcagggcacgcagttcctgtatgcatcgtcggccgcgatctac
ggcggctcgacgcgtttcgtcgaggagcgcgacgtcgaggcgccgctgaacgtgtacggc
tattcgaagttcctgttcgaccaggtgatccgtcgcgtgctgccgagcgcgaagagccag
atcgcgggcttccgctatttcaacgtgtacggcccgcgcgagacgcacaagggccgcatg
gcgtcggtcgcgtttcacaacttcaaccagttccgcgcggaaggcaaggtgaagctgttc
ggcgaatacaacggttatgcgccgggcgagcagacgcgcgatttcgtgtcggtcgaggac
gtgaccaaggtgaatctgttcttcttcgaccatccggagaagtcgggcatcttcaatctc
ggcacgggccgggcgcagccgttcaacgatatcgcttcgacggtcgtgaacacgttgcgc
gcgctcgacaaccagccgccgctgacgctcgcgcagcaggtcgagcaagggttgatcgag
tacgtgccgttccccgatgcgctgcgcggcaagtaccagtgcttcacacaggccgaccag
acgaaactgcgcgcggctggctacgacgcaccgttcctgaccgtgcaggaaggcgtcgat
cgttacgtgcgttggctatccggccgggtttaa
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