Burkholderia cenocepacia DDS 22E-1: DM39_889
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Entry
DM39_889 CDS
T03308
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen00540
Lipopolysaccharide biosynthesis
bcen01100
Metabolic pathways
bcen01250
Biosynthesis of nucleotide sugars
Module
bcen_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DM39_889 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bcen01005
]
DM39_889 (rfaD)
Enzymes [BR:
bcen01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DM39_889 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bcen01005
]
Core region
DM39_889 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
AIO33841
UniProt:
A0A088U9I8
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Position
1:960308..961300
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AA seq
330 aa
AA seq
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MTLIVTGAAGFIGANIVKALNERGETRIIAVDNLTRADKFKNLVDCEIDDYLDKTEFVER
FARGDFGKVRAVFHEGACSDTMETDGRYMMDNNFRYSRAVLDACLAQRAQFLYASSAAIY
GGSTRFVEERGVEAPLNVYGYSKFLFDQVIRRVLPSAQSQIAGFRYFNVYGPRETHKGRM
ASVAFHNFNQFRAEGKVKLFGEYNGYAPGEQTRDFVSVEDVAKVNLFFFDHPEKSGIFNL
GTGRAQPFNDIASTVVNTLRALDNLPPLTLAQQVEQGLIEYVSFPDALRGKYQCFTQADQ
TKLRAAGYDAPFLTVQEGVDRYVRWLSGQV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcatcgtcaccggcgcagccggttttatcggcgcaaacatcgtcaaggcgctc
aacgagcgcggcgaaacgcgcatcatcgcggtcgacaacctgacgcgcgcggacaagttc
aaaaacctcgtcgattgcgagatcgacgactatctcgacaagaccgaattcgtcgaacgc
tttgcgcgcggagatttcggcaaggtgcgcgcggtattccacgaaggcgcctgttcggac
acgatggaaaccgacggccgctacatgatggacaacaactttcgctacagccgcgcggtg
ctcgatgcatgcctcgcgcagcgcgcgcagttcctgtacgcgtcgtcggccgcgatctac
ggcggctcgacgcgattcgtcgaagagcgcggcgtcgaggcgccgctgaacgtgtacggt
tattcgaagttcctgttcgaccaggtgatccgccgcgtgctgccgagcgcgcaaagccag
atcgcgggcttccgctatttcaacgtgtacggcccgcgcgagacgcacaagggccgcatg
gcgtcggtcgcgttccacaacttcaaccagttccgcgcggaaggcaaggtgaagctgttc
ggcgagtacaacggctatgcaccgggcgagcagacgcgcgacttcgtgtcggtcgaggac
gtcgcgaaggtgaacctgttcttcttcgaccatccggagaagtcgggcatcttcaatctc
ggcacgggccgcgcgcagccgttcaacgatatcgcgtcgacggtcgtcaacacgctgcgc
gccctcgacaacctgccaccgctgacgctcgcgcagcaggtcgagcagggactgatcgag
tacgtgtcgttccccgacgcgctgcgcggcaagtaccagtgcttcacgcaggccgaccag
acgaagctgcgcgcggccggctacgatgcgccattcctgaccgtgcaggaaggcgtcgac
cgctacgtccgctggctgtccggccaggtttaa
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