Brevibacillus choshinensis: JNE38_28975
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Entry
JNE38_28975 CDS
T07271
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
bchs
Brevibacillus choshinensis
Pathway
bchs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bchs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JNE38_28975 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bchs03021
]
JNE38_28975 (rpoE)
03400 DNA repair and recombination proteins [BR:
bchs03400
]
JNE38_28975 (rpoE)
Transcription machinery [BR:
bchs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JNE38_28975 (rpoE)
DNA repair and recombination proteins [BR:
bchs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JNE38_28975 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
QRG67420
LinkDB
All DBs
Position
complement(5811421..5811984)
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AA seq
187 aa
AA seq
DB search
MSQLFAHVDSEKLSEMALVDIAYEILRQTNRTYNFRELVDELVAVRKLTKEQVMAIIAQV
YTEINIDGRFVCLGDNVWGLKRWYPTDTVEEQQEGGGTKKKKVILDDDFDDYDTEDEITE
EYEEDDVVIFEDEEEFVDEEAEIEEEIDGEIDEEEIDEEEELFEDEELEEEESDEDSEDL
DDEDDKL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcaattgtttgctcatgttgattccgagaaattaagtgagatggcattggttgac
atcgcgtatgaaattctgcgtcaaaccaatcgtacgtacaacttccgcgagctggtggat
gaactggttgccgttcgcaagttgacgaaagaacaggtcatggccattatcgctcaagta
tacacagaaattaacattgatggccgtttcgtttgcctcggtgacaatgtctggggtctg
aaacgctggtatccgactgacacagttgaagaacaacaagaaggcggcggaaccaaaaag
aaaaaggtcatcctggacgacgacttcgacgactacgataccgaagacgaaatcaccgaa
gagtacgaggaagatgatgtggtcatctttgaagacgaggaagaattcgtcgacgaagag
gcggagatcgaggaagaaatcgacggtgagatcgacgaagaagagatcgatgaagaagag
gaactctttgaagatgaagagctggaagaagaggagtcggatgaagatagcgaagatctt
gacgacgaggatgacaaattataa
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