Niallia circulans: C2I06_16920
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Entry
C2I06_16920 CDS
T06357
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
bcir
Niallia circulans
Pathway
bcir03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcir00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C2I06_16920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcir03021
]
C2I06_16920
03400 DNA repair and recombination proteins [BR:
bcir03400
]
C2I06_16920
Transcription machinery [BR:
bcir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C2I06_16920
DNA repair and recombination proteins [BR:
bcir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C2I06_16920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
Motif
Other DBs
NCBI-ProteinID:
AYV68412
LinkDB
All DBs
Position
complement(3545619..3546188)
Genome browser
AA seq
189 aa
AA seq
DB search
MSIDKYTQEELKEMSLIDVAHEIMNGGKTPYAFNELMDQVAKLVGLSEEEVNEKIAQLYT
DVNIDGRFLSLGDNRWGLRLWYPVDKSEEDVVTVTKPKKKKAKKAVDDDFDDFDSLDEDD
DFDDFDADLDDEELLDEDEDLDEEDDDLLDDDLSEEDDDFDEDYEIDDDELDEDEEEEDD
EFDDEDEDK
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgataaatacactcaagaagaactaaaagaaatgtcgctaattgatgtagca
catgaaattatgaatggtggtaaaacaccttatgcatttaatgaactaatggatcaagta
gcaaaattagttgggttaagtgaagaagaggttaatgaaaaaatagcacaattatataca
gatgttaatattgatggtcgcttcttatcattaggagacaatcgttggggacttcgttta
tggtaccctgtagataaatcagaagaagatgtcgtaacagttacaaaaccgaagaagaag
aaagcgaaaaaagctgttgatgatgacttcgatgattttgatagccttgatgaggatgac
gattttgatgactttgatgctgatctagatgacgaagagcttctagatgaggatgaggat
ttagatgaagaagatgatgatctattagatgacgatttgtcggaagaagatgatgatttc
gatgaagattatgaaatcgatgacgatgagctagatgaggatgaagaggaagaagacgac
gaatttgatgacgaggatgaggataaataa
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