Bradysia coprophila: 119071945
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Entry
119071945 CDS
T08269
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03020
RNA polymerase
bcoo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119071945
09124 Replication and repair
03420 Nucleotide excision repair
119071945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoo03021
]
119071945
03400 DNA repair and recombination proteins [BR:
bcoo03400
]
119071945
Transcription machinery [BR:
bcoo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119071945
DNA repair and recombination proteins [BR:
bcoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119071945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
119071945
NCBI-ProteinID:
XP_037032964
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Position
IV
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AA seq
277 aa
AA seq
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MPYANTPSVQISELTDENVKFVVEDTDLSLANSLRRVFIAETPTLAIDWVQFEANSTVLA
DEFLAHRIGLIPLISDEVVDRIQNTRECSCLDFCTECSVEFTLDVKCSDEHTRHVTTADL
KSSDARVLPVTSRHRDDEDNEYGETNDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPT
AGVSFEYDPDNSMRHTLYPKPDEWPKSEHTELDDDQYEAEYNWEAKPNKFFFNVESSGAL
RPENIVLMGVKVLKNKLSNLQTQLSHELTTNDALVIQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgccaacactccgtcagtacaaatatccgaacttaccgacgaaaatgttaaa
tttgttgttgaagacacagatctcagcctggcaaacagcctacgtcgagtttttattgcc
gaaactccaactctagctatcgactgggttcaattcgaagccaattccactgtactcgca
gacgaatttctcgcccatcgaatcggtttgattccactgatttccgacgaggtggtggac
agaattcaaaacactcgtgaatgttcatgcttggacttttgcaccgagtgtagtgtggaa
tttacgttggatgttaagtgcagtgatgagcatacacgtcacgttaccacagccgattta
aagtctagcgatgcacgcgtactgccggttacgtccagacaccgagatgacgaggacaac
gaatatggagagaccaacgatgaaattttgatcatcaaactgcgtaagggtcaagagttg
aagttgagagcgtacgctaaaaagggtttcggtaaagaacatgccaaatggaatccaaca
gctggcgttagctttgaatacgatccggataattcgatgagacataccctatacccaaaa
ccagacgaatggccgaaaagtgagcacacggagcttgacgatgatcaatatgaagctgaa
tataactgggaggctaagccgaataaatttttcttcaacgttgagtccagtggcgcactt
cggccagaaaatattgtgttgatgggagtcaaagttttgaagaacaaattatccaatcta
cagacgcagttaagtcacgaacttactacaaatgacgcattggtgattcagtaa
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