Bacillus cereus AH187: BCAH187_A3865
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Entry
BCAH187_A3865 CDS
T00799
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bcr
Bacillus cereus AH187
Pathway
bcr03030
DNA replication
bcr03430
Mismatch repair
bcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCAH187_A3865 (polC)
03430 Mismatch repair
BCAH187_A3865 (polC)
03440 Homologous recombination
BCAH187_A3865 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcr03032
]
BCAH187_A3865 (polC)
03400 DNA repair and recombination proteins [BR:
bcr03400
]
BCAH187_A3865 (polC)
Enzymes [BR:
bcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BCAH187_A3865 (polC)
DNA replication proteins [BR:
bcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BCAH187_A3865 (polC)
DNA repair and recombination proteins [BR:
bcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BCAH187_A3865 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DUF1409
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ACJ79444
UniProt:
B7HLF1
LinkDB
All DBs
Position
complement(3617434..3621735)
Genome browser
AA seq
1433 aa
AA seq
DB search
MSLTNEQKERFQILLQQLQIPDDLINQYLQGGGIERLVIDKANKSWHFNLQVPRILPTEL
YELLETKLKQSFSHIARTTFALETENKQFTEEEVRAYWPLCTERITFSPMFAYLKKQLPQ
VNGVKLLINVNNELESTALKKNVAKPVGDQYEAFGFPRFQLDTHIQQNTEEMQKFREQTQ
QEDRERVIQAMEEMAKKQAEESSVVHEGPITLGYLIKPDEEITPMREIQDEERRKTVQGY
VFHVETKELRSGRTLLTLKITDYTDSIMIKMFSRDKEDIPMLQSLKKGMWVKARGSVQND
TFVRDLVMIANDINEITGPSRKDKAPEGEKRVELHLHTPMSQMDAVTPVSKLVAQAGKWG
HEAIAITDHAVAQSFPEAYSAGKKAGIKVIYGVEANLVNDGVPIAYNEAHRLLAEETYVV
FDVETTGLSAVYDTVIELAAVKVKGGEIIDRFESFANPHQPLSATIIELTGITDDMLTDA
PEVDEVFKKFEEWMGDHTLVAHNASFDMGFINVGFKKAGLEKTKNPVIDTLELARFLFPE
MKNHRLNTLCKKMDIELTQHHRAIYDTEATGYLLVKMLKDVIEKGFEYHDQLNDSMGQGD
AYKRGRPSHMTLLATSDVGLKNLYKLVSYSHLNYFYRVPRVPRSLLKKYREGILVGTACD
KGEVFEAMMQKAPEEVEEIAQFYDYIEVMPPEVLRHLVERELVRDEGQLKTIISNLVKLG
ETLDKPVVATGNVHYLNPEDAMYRKILVSSQGGANPLNRHSLPPVHFRTTDEMLECFSFL
GEDVAKEIVVTNTQKIASLIGDVHPVKDDLYTPKIEGADDETRDMSYKMARSIYGEELPE
IVEARLEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSFVATMMEITEVN
PLPPHYVCPKCKQSEFFNDGSVGSGFDLPDKECPTCNIPYVKDGHDIPFETFLGFKGDKV
PDIDLNFSGEYQPRAHNYTKVLFGEDYVYRAGTIGTVAEKTAYGYVKGYANDHNLTIRNA
EIDRLVAGCTGVKRTTGQHPGGIIVVPDYMDIFDFSPIQYPADSIGAEWRTTHFDFHSIH
DNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSGPESLGVTEEQINCKTG
TLGIPEFGTKFVRQMLEETKPTTFSELVQISGLSHGTDVWLGNANELIYNGTCTLSEVIG
CRDDIMVYLIYQGLDPSLAFKIMESVRKGKGVPEEWEEDMKSNNVPGWYIDSCKKIKYMF
PKAHAAAYVLMAVRIAYFKVHFALLFYAAYFTVRADDFDVEAMAKGSASIRARIDEIAQK
GLDAAPKEKSLLTVLEMTLEMCERGYSFQKVDLYRSHATDFIIDGDSLIPPFNAVPGLGT
NAALSIVEARKNGEFLSKEDLQQRSKVSKTIIEYLDSQGCLGDLPDQNQLSLF
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacaaatgaacaaaaagagcgatttcaaattttgctccagcagttgcaaata
ccagacgaccttataaatcaatatttacaaggcggtggtattgaaaggctcgttatcgat
aaagcgaataaaagttggcattttaatttacaagtgccacgtattttgcctacagaatta
tatgaattgctagaaacaaagcttaagcaatcattttctcatattgcaagaacaacattt
gcattagaaacagagaacaaacaatttactgaagaagaagtgagggcgtattggccactt
tgtacggaacgaattacattttcacctatgtttgcttatttaaagaagcagcttccgcag
gtcaatggagtgaagttacttataaatgtgaataatgagctggaatctactgctttaaag
aaaaacgttgcaaaaccagtaggggatcaatacgaggcttttggattcccgcgtttccag
ttagacacacatatacagcaaaatacagaagaaatgcaaaagtttcgtgagcaaacgcag
caagaagaccgcgagcgtgttatacaagctatggaagaaatggcgaagaagcaagctgaa
gaaagcagcgttgtgcatgaagggccgatcacactcgggtatcttattaagccagatgaa
gagattacaccaatgcgagaaattcaagatgaagaaagaagaaaaacagttcaaggatat
gtcttccatgtggaaacgaaagagcttcgtagtggacgtacgttattaactttaaaaata
acggattatacagattcgattatgatcaaaatgttctcacgtgataaagaagatattcca
atgctacaatccttgaaaaaaggaatgtgggtgaaggctcgtggttctgttcaaaatgat
acatttgttcgagatttagtaatgattgcaaatgatattaatgaaataacaggaccgtct
cgtaaagataaagcaccagaaggcgaaaaacgagtagagctccatcttcacacgccaatg
agtcaaatggatgctgttactccagtttctaagcttgttgctcaagctggtaaatggggg
catgaggctattgccattacagaccatgctgttgcacagtcattcccagaagcatattca
gctgggaaaaaagccggaattaaagttatatatggtgtggaagcaaacttagtgaatgac
ggtgtaccaatagcgtataacgaagcgcatcgtttacttgcagaggaaacgtatgttgtt
ttcgacgttgagacgacaggtttatcagctgtatatgatacagttattgagttagctgct
gtaaaagtaaaaggcggcgaaattattgaccgctttgaatcttttgcaaatccgcatcaa
ccattatcggcaacgatcattgaattaacaggtattacagatgatatgttaaccgacgca
ccagaagtggacgaagtgtttaaaaagtttgaagaatggatgggcgaccatacacttgtt
gctcataacgcaagcttcgatatgggctttattaacgtaggatttaaaaaagctggttta
gaaaaaacaaaaaatccagtaatagatacgttagagcttgcacgattcttattcccagaa
atgaaaaatcaccgtttaaatacgttgtgtaaaaagatggacattgaattaactcagcat
caccgtgcgatttatgatacagaagcaacgggatacttactagtgaaaatgttaaaagat
gtaattgaaaaaggttttgaatatcacgatcaattaaacgatagtatgggacaaggggat
gcatataagcgcgggcgtccaagtcatatgacattacttgctacatcggatgttggattg
aaaaatttatataaacttgtttcatattctcatttaaattacttttaccgtgtaccgcga
gtaccaagatcactattaaaaaaatatcgtgaaggtattttagtaggaacggcttgtgat
aaaggtgaagtgtttgaggcaatgatgcaaaaagctcctgaagaggtagaagaaattgcg
caattctacgattacattgaagtaatgccaccagaagtgttacgtcatttagtagagcgt
gaacttgttcgggatgaggggcaattaaaaacaattatttcaaacttagtaaaactaggt
gagacgttagataaaccagttgtcgctaccggaaacgtgcattacttaaatccagaagat
gcaatgtatcgcaaaattttagttagttcgcagggcggagccaatccgttaaaccgacat
tcattaccacctgtacatttccgtacaaccgatgaaatgttagagtgtttctcattctta
ggtgaagatgtagcgaaagaaattgtcgtaacgaatacacaaaagattgcatcattaatt
ggcgatgttcatccagtaaaagatgatctatacacaccgaaaattgaaggtgcagatgat
gaaacacgtgatatgagttataaaatggcgcgtagcatttatggtgaagagttacctgaa
attgtagaagcgcgtttagaaaaagaattaaaaagtatcatcgggcatggattcgccgta
atttatttaatttcacataagcttgtgaaaaaatcgttagtagacggatatctagtaggt
tcgcgtggatcggtaggttcatcattcgttgcaacgatgatggaaattacagaagtaaat
ccattaccaccacactatgtatgtccgaaatgtaagcaatcagaattctttaatgatggt
tctgtaggttctggttttgacttaccggataaagaatgtccaacttgtaatattccatat
gtaaaagatggacatgacattccgttcgaaacgttccttggatttaaaggagataaggta
cccgatatcgatttgaatttctccggggaataccaaccacgtgcccataactatacgaaa
gtactattcggtgaagattatgtatatcgtgcaggaacgattggtacagttgcggaaaaa
actgcttatggatatgtaaaaggttatgcaaatgatcataacttaacgattcgaaatgca
gaaattgaccgcttagtagcaggatgtaccggtgtaaaacgtacaacagggcagcatcca
ggtggtattatcgttgtgccagattacatggacatttttgatttctcaccaatacagtat
ccagcagattcaataggtgctgagtggagaacgacacactttgacttccactctattcat
gataatttattgaagcttgatatactaggacacgatgatccgacagttattcgtatgtta
caagatttaagtggtattgatccgaaaacaatcccaacggacgatccagaagtaatgaag
attttctcagggccagaatcgttaggcgtaacggaagaacaaattaactgtaaaacaggt
acacttggtataccagagtttggtacgaaattcgtaagacagatgttagaagagacgaaa
ccgacgacgttctcagagttagtccaaatttctggattatcacatggtacggacgtatgg
cttggtaatgcgaacgagttaatttataacggtacatgtacgctgagtgaagttatcggt
tgtcgtgatgacatcatggtatacttaatctatcaaggtttggacccatcattagccttc
aaaatcatggagtcagtacgtaaaggtaaaggtgtaccagaagaatgggaagaggacatg
aaaagtaataatgtaccaggttggtatattgattcatgtaagaagattaagtacatgttc
ccgaaagcccatgcggctgcttatgtacttatggctgtgcgtatcgcatactttaaagta
catttcgcgcttttattctatgcggcatactttacggttcgtgcagatgactttgacgta
gaagcgatggcaaaaggttcagcatctatacgtgcaagaatcgatgaaattgcgcaaaaa
ggtttagatgcagcaccgaaagagaagagtttattaacggtactagaaatgacacttgaa
atgtgtgagcgtggatactcattccaaaaggtcgatttatatcgctcacatgcaacagac
tttattattgatggagactcattaatccctccatttaatgcggtgcctggtcttggtaca
aacgcagctttaagtattgtggaagcacgtaaaaatggagaattcttatcaaaagaagac
ttgcagcagcgtagtaaggtttcgaaaacaattattgagtatttagatagtcaaggttgt
ttaggtgatttgccggatcaaaaccagttatcgctgttctga
DBGET
integrated database retrieval system
