Cytobacillus dafuensis: FSZ17_22115
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Entry
FSZ17_22115 CDS
T06982
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
bda
Cytobacillus dafuensis
Pathway
bda03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FSZ17_22115 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bda03021
]
FSZ17_22115 (rpoE)
03400 DNA repair and recombination proteins [BR:
bda03400
]
FSZ17_22115 (rpoE)
Transcription machinery [BR:
bda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FSZ17_22115 (rpoE)
DNA repair and recombination proteins [BR:
bda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FSZ17_22115 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
ADIP
DUF4777
Motif
Other DBs
NCBI-ProteinID:
QED49751
UniProt:
A0A5B8Z9Y8
LinkDB
All DBs
Position
complement(4670372..4670935)
Genome browser
AA seq
187 aa
AA seq
DB search
MNLNELTKEELQEMSLIEIAYELLRSRKEAMAFKEIMDELINLLELSDDQVKAKIAQFYT
DLNIDGRFLGLGDNRWGLRVWYPVDQVEEEVVTAIKPKKKKAKKAQEDEDLDDYDDLDDE
DIDYDDIDDLDDEDELLDDEDDEDLLEDDEDLEDDELIERDEEYDLGDEDEELDDEDSDL
DEDEEDI
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttaaatgaacttactaaagaagaattacaggaaatgtctctcattgaaatcgct
tatgaactattaagaagtagaaaagaagcgatggcttttaaagaaattatggatgaactt
attaatctacttgagctatcagatgatcaagtaaaagcaaaaattgcccagttctataca
gatttaaatattgatggccgcttcttaggtttaggagacaatagatggggtctgcgagtc
tggtatccagttgaccaagtggaagaagaagttgttacagctattaaaccgaagaagaag
aaagcgaaaaaggctcaggaagatgaggatcttgatgattacgatgatctagatgacgaa
gatattgattatgatgatattgacgatttagatgacgaagatgagctattagacgatgaa
gatgatgaggatttgcttgaagatgatgaggatttagaggatgatgaactcattgagcga
gatgaagagtatgatcttggtgatgaggacgaagagctagatgacgaagattccgactta
gacgaggatgaagaggatatataa
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