Bdellovibrio sp. NC01: DOE51_18830
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Entry
DOE51_18830 CDS
T06360
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bdc
Bdellovibrio sp. NC01
Brite
KEGG Orthology (KO) [BR:
bdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdc03009
]
DOE51_18830 (rimO)
Enzymes [BR:
bdc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DOE51_18830 (rimO)
Ribosome biogenesis [BR:
bdc03009
]
Prokaryotic type
ribosomal protein modification factors
DOE51_18830 (rimO)
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
ALS2CR8
CLP1_P
CDT1_C
Motif
Other DBs
NCBI-ProteinID:
QDK39504
UniProt:
A0A514X2I6
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All DBs
Position
complement(3895878..3897254)
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AA seq
458 aa
AA seq
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MKQETSQTSNKVHFISLGCPKNLVDSEIMAGTLMKDGYQVVGEAEDADTVIVNTCGFIED
SKKESIQRILDMSDLKAEGKIKKVVVAGCLTQRYKDELVEGLPEADLFVGSGEFQNIAKI
LKKSDEGEKQKTFFNLPTYLQEEETPRVNSQPGHRAYLKISEGCMKRCAFCAIPLIRGNL
QSRSIDAIVAEAKLLVAGGVKELIIISHDFTDYGFDIRRKDPTRKESPVELLKALDQVEG
LQWIRLMYLYPDGITQEMVQVIKNSKKIVKYFDMPLQHINDQVLKSMNRKMTRDEIETAL
MNIREHLPEAVVRTQFIVGFPGETQEQFEELLAFIAEQQFDRVGCFKYSPEENTPGGRMD
NQIDEETKQFRHDAVMEVQQNISREKHRDFVGKTIDVIVEGFSEETDLLLQGRFWGQAPD
IDGVVLINDGEAKVGDMVKVHITDSMEYDLLGEIVTEN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagaaacttctcaaacttcaaacaaagttcatttcattagcttgggttgccct
aagaacctcgtagacagtgagatcatggccggcactttgatgaaggacggttatcaagtt
gttggcgaagctgaagacgctgatacagttatcgtcaatacttgcggtttcatcgaagac
tcgaaaaaagaatctatccaacgtattttggacatgagcgatcttaaagcagaaggcaaa
atcaaaaaggttgttgtcgctggttgcctcactcaacgttataaagatgaactagttgaa
ggtttgccagaggcagatcttttcgttggctctggtgagttccaaaacatcgctaaaatc
ttgaaaaaatcagatgaaggcgaaaaacaaaaaacgttcttcaatcttcctacttacttg
caagaagaagaaactccacgcgtgaactctcaaccgggtcaccgtgcttatttgaaaatt
tctgaaggttgcatgaagcgttgtgctttctgcgcgatccctttgatccgtggtaacttg
caatctcgttctatcgacgccatcgttgcggaagcaaaattgttggtagcgggcggcgtg
aaagagttgatcatcatcagccatgacttcactgattatggtttcgatatccgtcgcaaa
gatccaactcgtaaagaaagccctgttgaattattgaaagcccttgatcaagttgaaggc
cttcaatggattcgtttgatgtacttgtatccagatggaatcactcaagagatggttcaa
gttatcaagaacagcaaaaagatcgtgaaatacttcgatatgcctttgcaacacatcaac
gatcaggttcttaaatcaatgaaccgcaagatgactcgtgatgaaattgaaacggcgttg
atgaacatccgcgaacatcttccagaagctgttgtaagaactcagttcatcgttggtttc
cctggcgaaactcaagagcaattcgaagagttgttggcgtttatcgctgaacaacaattc
gatcgcgttggttgcttcaagtactctcctgaagaaaacactccaggtggtcgtatggac
aatcaaattgacgaagaaacaaaacaattccgtcatgacgctgtgatggaagttcagcaa
aatatctctcgcgaaaaacaccgcgacttcgttggtaaaactatcgacgtgattgttgaa
ggtttctctgaagaaactgatttgttgttgcaaggtcgtttctggggtcaagctccagat
atcgatggcgttgttcttatcaatgatggtgaagctaaagtcggtgacatggttaaagta
cacatcaccgacagcatggaatacgaccttcttggtgagatcgtaacagaaaactag
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