Bradyrhizobium daqingense: LPJ38_01120
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Entry
LPJ38_01120 CDS
T07756
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg00362
Benzoate degradation
bdg01100
Metabolic pathways
bdg01120
Microbial metabolism in diverse environments
bdg01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LPJ38_01120 (pcaB)
Enzymes [BR:
bdg01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
LPJ38_01120 (pcaB)
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Motif
Pfam:
Lyase_1
ADSL_C
TetR_C_18
Motif
Other DBs
NCBI-ProteinID:
UFS89427
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Position
complement(242754..244115)
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AA seq
453 aa
AA seq
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MPAFPASTTVIDSMLFRDAFGTPEMREVFSDVALVARYAEVEVALAKAEARCGVIPQDAA
DQISARTNVTALDFELLRQETDIVGYPILPLVHQMVKQCGEAGRYVHWGATTQDIMDTAV
VLQLRAALAIVERDIAELRRILADLSKRYRDTPMAGRTHLQQALPVTFGYKTAIWLAMFD
RHAERLAQLKPRVLVGQFAGAAGTLASLGDKGFEVQEALCAELKLGVPASTWHVARDGFA
EAVNFLALVTGSLGKIALDIMIMASTEFAEVYEPFVKGRGASSTMPQKRNPISSELMLAA
SKAVRQHAGLMLDAMVQDFERATGPWHAEWMAIPESFVLTAGALHQAKFALAGLIVDEAK
MNDNLAVSRGLIVAEAVMMGLAPQIGRQEAHDVVYDACRLANDEGLSLADALSSDARVSS
RIDRVTIEALTSPKNYLGLAPAMVDRVLKSATR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcttttcccgcctccaccaccgtgatcgactccatgcttttccgcgacgccttc
ggcacgcccgagatgcgggaggtgttttccgatgtcgcgctggtggcgcgctatgccgag
gtcgaggtggcgctggcgaaggcggaggccagatgcggcgtgatcccgcaggacgccgcc
gaccaaatttcggcgcggaccaatgtcaccgcactcgatttcgagctgttgcggcaggag
accgacatcgtcggctatccgattctccccctggtgcatcagatggtgaagcaatgcggc
gaggccggccgctatgtgcactggggtgcgaccacgcaggacatcatggacaccgctgtg
gtcctgcagctgcgtgccgcgctcgcgatcgtcgaaagggacattgccgagctccgccgc
attctggccgacctgtcgaagcgataccgcgacacgccgatggcgggccgcacccatctc
cagcaggcgctgccggtgacgtttggctacaagaccgcgatctggctcgcgatgttcgac
cgccatgccgaacgtctggcgcaattgaagccacgtgtcctggtcggtcagtttgcgggc
gccgccggcacgctggcctcgctcggcgacaagggattcgaggtgcaggaagctctgtgc
gccgaattgaagctcggcgttcccgcctcgacctggcacgtcgcgcgcgacggctttgcc
gaggccgtgaatttcctggcgctcgtcaccggttcactcggcaagatcgcgctcgacatc
atgatcatggcctccaccgaattcgcggaggtctatgaacccttcgtcaaaggccgcggc
gcctcctcgaccatgccgcagaagcgcaacccgatctcctccgaactgatgctcgcggca
tccaaggcggtgcgccagcacgcgggcttgatgctcgatgccatggtgcaggatttcgag
cgcgccaccggtccctggcacgccgaatggatggcgatccccgaaagcttcgtgctgacg
gccggcgcgctgcaccaggcgaagttcgcgctcgcgggcctcatcgtggacgaggcgaag
atgaacgacaatctcgccgtcagccgtggcctgatcgtcgccgaagcggtcatgatgggg
ctggcgccgcagatcgggcggcaggaggcgcatgacgtggtctacgatgcctgccggctc
gccaatgacgaaggcttgagcctggcggatgcgctgtcgtccgatgcgcgcgtctcgagc
cgcatcgaccgcgtcacaatcgaggcgctcacctcaccgaaaaattacctcggccttgcg
cccgccatggtcgaccgggtgctgaaatcggcaacgcgttga
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