Bradyrhizobium daqingense: LPJ38_22630
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Entry
LPJ38_22630 CDS
T07756
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg00190
Oxidative phosphorylation
bdg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LPJ38_22630
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPJ38_22630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdg03019
]
LPJ38_22630
Enzymes [BR:
bdg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LPJ38_22630
Messenger RNA biogenesis [BR:
bdg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LPJ38_22630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
UFS92823
LinkDB
All DBs
Position
complement(4805523..4807715)
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AA seq
730 aa
AA seq
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MDSAQAVETKEKPQEPEGLPAIASSPERFINRELSWLHFNRRVLEESVNPSHPLLERVRF
LSISANNLDEFFMVRVAGIKAQVREGIAERSPDGLTPSEQLALINRTVSELASDQQAIWR
DLRGTLAEVGIVLVEGKEVTKAERAWIEDYFLNNVFPLLTPLAIDPAHPFPFIPSLGFTI
ALQLTRAADGRQMNALIRMPGKIDRFIRLPAEGKAVRLISLEQATALFINRLFPGYNLRG
QGAFRIIRDSELEIEEEAEDLVRLFETALKRRRRGSVIRLEIDAKMPEELRSFVQHALSA
ADDEVFLVDGVQAMNELSQLTRLDRPDLEFTPYVPRHPERVREHGGDIFAAIRQKDLVVH
HPYESFDVVVQFLQQAARDPDVVAIKQTLYRTSNNSPIVRTLAEAAEAGKSVTALIELKA
RFDEEANIRWARDLERAGVQVVYGFLELKTHAKLSMVVRREGGNLTTYVHTGTGNYHPVT
ARIYTDLSYFTSDPTIGRDAARVFNFITGYAAPSDLEKMAVSPLTLRKRIIEHIQGETAH
ARHGRHGAVWMKMNALVDPDIIDALYEASQAGVQVELVVRGICCLRPGIPGLSENIRVKS
IIGRFLEHGRIYCFGMGQGLPSAKAAVYISSADMMPRNLDRRVEVLCPLQNPTVHQQVLE
QIMVANLKDNEQSWQLLPDGSSTRMKAAKGDEPFNVHNYFMTNPSLSGRGKSLKESSPRR
LTRRNERHQS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggattccgcgcaagctgttgaaacaaaagaaaaaccccaggaacctgagggcctgccg
gcgatcgcgtccagccccgagcgattcatcaaccgcgagctctcctggctgcatttcaac
cgccgcgtcctggaggaatcggtcaatcccagccaccccctgctggaacgcgtgcgattc
ctgtcgatttcggcgaataacctcgacgaattcttcatggtccgcgtcgccggcatcaag
gcccaggtgcgcgagggcattgccgaacgcagccccgatggcctgacgccctccgaacaa
ctcgctctgatcaatcgcaccgtctccgagcttgcctccgaccagcaggcgatctggcgc
gatctgcgcggcacgctcgccgaggtcggtatcgtgctggtcgaaggcaaggaggtcacg
aaggcggaacgagcctggatcgaggattatttcctcaacaacgtgttcccgctgctgacg
ccactcgcaatcgatccggcccaccccttcccgttcattccgagcctcggcttcaccatc
gcgctccagctcacccgtgccgccgatggcaggcagatgaacgcgctgatccgcatgccc
ggcaagatcgaccgcttcatccgcctgcccgccgagggcaaggccgtccggctgatctcg
ctggagcaggcgaccgccctgttcatcaaccgcctgttccccggctacaatctgcgcggc
cagggtgctttccgcatcatccgcgactccgagctcgaaatcgaggaagaggcggaagac
ctcgtccgcttgttcgagacagcactgaagcggcggcgccgcgggtcggtgatccggctc
gagatcgacgccaagatgccggaggagctgcgcagcttcgtccagcatgcgctgtcggcc
gccgacgacgaggtattcttggtcgacggcgtgcaggcgatgaacgagctctcgcagctc
acgcgcctcgaccgtccggacctcgaattcacgccttacgtgccgcgtcaccccgagcgc
gtgcgcgagcacggcggcgacatctttgccgcgatccggcagaaggacctcgtcgtccac
cacccctacgagtccttcgacgtggtggtgcagttcctgcaacaggcagcacgcgacccc
gacgtcgtcgcgatcaagcagacgctctatcgcacctccaacaactcgccgatcgtgcgc
acgcttgcggaggccgccgaagccggcaagtccgtcaccgcgctgattgagctgaaggcg
cgcttcgacgaagaagccaacatccgctgggcgcgcgacctcgaacgtgccggcgtgcag
gtcgtctacggcttcctcgaattgaagacgcacgcgaagctctcgatggtagtgcgccgt
gaaggcggcaacctcacgacctacgtccataccggcaccggcaactatcatccggtcaca
gcgcgcatctacaccgacctctcctacttcacctcggatccgaccatcggccgcgacgca
gcgcgtgtgttcaacttcatcaccggctatgccgcgccgagtgacctggagaagatggcg
gtatcgccactgaccctgcgcaagcgcatcatcgagcacatccagggcgagaccgcgcat
gcgcggcacggccggcacggcgcggtctggatgaagatgaatgcgctggtcgaccccgac
atcatcgacgcgctctacgaggcttcgcaggccggcgttcaggtcgagctcgtggtacgc
ggcatctgctgcctcaggccgggaattcccggcctgtcggagaacatccgcgtcaaatcg
atcatcggacgcttcctggaacacgggcgaatctattgcttcggcatgggtcagggcctg
ccgagcgcaaaagcggctgtgtatatctcctcggccgacatgatgccgcgcaacctcgac
cgccgcgtcgaggtgctgtgtccgctgcaaaatcccacggtgcatcagcaggttctcgaa
cagatcatggtcgcgaacctgaaggacaatgagcagagctggcaattgttgccggacggg
tcctcaacgcgtatgaaggccgcgaagggcgacgagcctttcaacgtccacaactacttc
atgacgaatccgagtctgtctggccgtggaaagtcgctcaaggaatcctcgccgcgccgt
ctcacgcgtcgtaacgaacgccatcaatcctga
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