Brachypodium distachyon (stiff brome): 100823561
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Entry
100823561 CDS
T01717
Name
(RefSeq) ABC transporter D family member 1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi02010
ABC transporters
bdi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100823561
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100823561
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdi02000
]
100823561
Enzymes [BR:
bdi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
100823561
Transporters [BR:
bdi02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
100823561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_16
AAA_23
AAA_22
SMC_N
nSTAND1
AAA_7
Rad17
DUF815
AAA_30
Motif
Other DBs
NCBI-GeneID:
100823561
NCBI-ProteinID:
XP_010231855
UniProt:
A0A0Q3R3K2
LinkDB
All DBs
Position
2:39239319..39250115
Genome browser
AA seq
1324 aa
AA seq
DB search
MPSLQLLKLTEHGRGLLASRRRTLAVVSGALVAGGALAYARSARGRRRRSGSEGGDDGDA
LARNGGRLGQNGVDGRLAGTKRRKSALKSLHFLAAILLKKIGPNGTRYLLGLMLTAVLRT
AVGHRLAKVQGYLFKAAFLRRVPTFTRLIIENLILCFLQSAVYQTSKYLTGSLNLRFKKI
LTDLVHADYFQNMVYYKISHVDHRISNPEQRIASDIPKFCSELSELVQDDLAAVAEGLIY
TWRLCSYASPKYMIWILAYILVAGGAIRNFTPAFGKLKSTEQHLEGEYRQLHSRLRTHAE
SVAFYGGENREASHIMQRFKALVRHLNHVIHENWWFGMIQDFFLKYFGATVAVVLIIEPF
FSGDLRPDSSTLGRADMLSNLRYHTSVIISLFQSLGTLSISTRRLNILSGYADRIRELLD
VSRELSGVRDRSLNHNFSAGNYISEANHIEFSGVKVVTPAGNVLVDDLTLRVETGSNLLI
TGPNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYTAVGTLREQLIYP
LTADQEIEPLSYDGMMDLLKNVDLEYLLQRYPLDKEVNWGDELSLGEQQRLGMARLFYHK
PKFAILDECTSAVTIDMEERFCKKVRAMGTSCITISHRPALVAFHNIVLSLDGEGGWDVQ
HRRDDSSFSTEESDFTSLETDRKSDALTVQRAFMNKSKSNASLRAKEHSYSTKVIATSPK
LETEQTVRTPLIPHLQCSPRPLPLRAASMLKILVPKLLDKQGGQLLAVTLLIFSRTVISD
RIASLNGTTVKFVLEQDKAAFIRLVGVSVLQSAANSFVAPSLRTLTARLALGWRIRMTNH
LLQYYLRRNAFYKVFNMSGKSIDADQRLTLDVDKLSTDLAGLVTGMVKPLVDILWFTWRM
KLLSGRRGVGILYAYMLLGLGFLRAVSPDFGHLASQQQELEGTFRFMHSRLRTHAESIAF
FGGGSREKAMVEAKFMKLLNHSKVMLRKQWLYGIVDDFVTKQLPHNVTWGLSLLYALEHK
GDRALTSTQGELAHALRFLASVVSQSFIAFGDILELHKKFLELSGGVNRIFELEEILRAA
QRDTVVPSSAISSASEEIISFHEVDIVTPTQKLLANKLSCNVVQGKSLLLTGPNGTGKSS
VFRVLRNLWPVFSGRVNKPSEGVFHVPQSPYTSLGTLRDQIIYPLSREEAEIKILSLHKA
GNMSSAPELLDDHLKTVLVNVRLVYLLEREGWDSTPNWEDVLSLGEQQRLGMARLFFHHP
KFGILDECTNATSVDVEEHLYRLATSMGITVITSSQRPALIPFHSVELKLIDGEGNWELC
EIQH
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctctgcagctgctgaagctgaccgagcatgggcgggggctcctggcgtccagg
aggagaaccctggctgttgtttccggggcgctggtcgctggcggggctttagcgtatgcg
cggtcggcccgaggccggaggaggagaagcggttcggaaggtggtgatgatggtgatgca
ttggcgaggaatgggggaaggttgggtcaaaatggtgtggatggtaggttggctgggacg
aagcggaggaagagtgctttgaaatctttgcatttcctggctgctatcctgctcaagaag
attggcccgaatggcacgcgctaccttcttggcttgatgttaacagccgtgctgcgtact
gctgtggggcatagattagcaaaagtacaaggctacttgtttaaagcagcatttcttcgg
cgtgttccaacctttacgcgcctaattatagaaaatctaatcttatgctttctccagtca
gcagtataccagacctcaaaatacttaacagggtctttgaatttgcgcttcaagaaaatt
ttaacagacctcgtccatgctgattattttcagaatatggtttactacaagatctcacac
gtggatcatcgaatatcaaacccagagcaaaggattgcgagtgatattccaaagttctgt
tctgaacttagtgaacttgtacaggatgatttggctgcagttgcagaagggttgatatat
acctggcgtctctgttcttatgctagtccaaaatacatgatttggattctggcatatata
ctagttgctggtggagcaattagaaatttcactcctgcttttggaaaactgaaatccaca
gagcagcacctagaaggggagtatcgtcaactccattcacgcttaagaactcatgctgag
agtgtggcattttatggtggcgagaacagagaagcatctcatattatgcagcggttcaag
gcacttgttaggcacttgaatcatgtaatccatgaaaactggtggtttggcatgattcaa
gatttctttctgaagtactttggtgccactgtagcagttgtcctaattatcgaaccgttc
ttctctggcgaccttagacccgattcatctaccctaggaagggctgatatgttgagtaat
cttcgataccacacaagcgtcatcatatcattgtttcagtctctcgggaccctctctatc
agtactaggcgtttaaacatcctgagtggctatgcagaccgaattcgtgagttgctagat
gtttcacgcgagctgtctggggttcgtgatagatcgttgaatcacaatttttctgctgga
aattatatcagtgaagcaaaccatatagaattttcaggtgttaaggtggtgacacctgct
gggaatgttttggttgacgatttaactctccgagtagaaacgggttctaatctcttgatc
actggtcccaatggtagtgggaaaagctcccttttccgtgtccttggggggctatggcca
ctggtatctggtcatattgtcaaacctggtgttggttctgatcttaacaaggaaatcttt
tatgtcccacaaagaccatacactgctgtcggcacacttcgcgaacagctaatctatcct
cttacagctgatcaggagattgaaccacttagctatgatggcatgatggaccttctaaag
aatgttgacctggaatacttgctacaacgttatcctcttgacaaagaagtcaactggggt
gatgagctatctcttggtgagcaacaaagactaggaatggccaggctgttctaccataag
ccaaagtttgccattcttgatgagtgtactagtgctgtgacaattgatatggaagaacgt
ttttgcaaaaaggttcgagcgatgggaacgtcatgcataacaatatctcatcgcccagct
ttagttgcatttcataatattgtcctgtccttggatggtgaaggaggatgggatgttcag
cacagaagggatgactcatcctttagcaccgaagagtctgactttacatcactggagact
gatcgtaaatcagatgccctaactgttcaaagggcttttatgaacaagtcaaagagcaat
gcttcattaagggccaaggaacattcttattctacaaaggttatagcaacttcccccaaa
ttggaaacagaacaaacagtgcgaacacctctaattccacacttacaatgctccccaagg
cctctacctctgcgagcagcttctatgcttaaaatattggttcctaaattacttgacaaa
caaggagggcagttgcttgctgtcactctacttattttctcccgcactgtgatctcggat
cgtattgcctcgttgaatgggacaactgtgaagtttgtcttggagcaggacaaagctgct
tttattcgtctggttggtgttagcgtgctgcaaagtgctgcaaattcttttgtcgcgcca
tctttgagaacccttaccgcaagacttgcccttggatggcgaattcgcatgaccaaccat
ttgcttcaatattatttgagaagaaatgcattctacaaggtattcaatatgtcaggtaaa
agtattgatgcagaccaaagattgacacttgatgtggataagttgagcactgaccttgct
ggcttggttactggaatggtaaaaccactagtcgacattctttggtttacgtggagaatg
aagcttttgtcgggacgaagaggagttggtatattgtatgcttacatgttactaggtttg
ggctttctgagagctgtatcccctgactttggtcatcttgcaagtcaacaacaagaactt
gaaggaacattcaggttcatgcactcgaggttgcggacacacgctgaatcaattgctttc
tttggtggtggttcaagagaaaaagctatggttgaagctaaattcatgaaattgcttaac
cactcaaaggttatgttaagaaaacaatggctttatggtattgttgacgattttgtgaca
aagcaactcccacacaatgtgacatggggtctgagtttgttatatgctctggagcacaag
ggagacagagctttgacttcaacacaaggagagttggcacatgctctgcggttcttggca
tctgtggtgtcacaaagcttcatagcctttggcgacattcttgagttacataagaaattc
cttgaactttctggtggggttaaccggatctttgagcttgaggagattctacgtgcagct
caaagggatactgtggtgccttccagtgccattagttcagcatcagaagaaattatttca
ttccatgaagtggatattgtgacaccaacgcagaagctattggctaacaagctgtcatgc
aatgtggtacaagggaaaagccttctcctgactggccccaatggtaccgggaagagttct
gtttttagggtgctcagaaatttatggcccgtcttttctgggagagttaacaagccttct
gaaggggtgttccatgttcctcagagtccatataccagcttgggtactctgagggatcag
atcatataccctctatcaagggaggaagcagagataaagattctttcgttacataaggct
ggcaacatgtctagtgctcctgagttgctagatgatcacctgaagacggttcttgtgaat
gtccggttggtctatcttctagagagagaaggttgggactctaccccaaactgggaggat
gttttgtctctcggagaacagcagaggcttgggatggctcgtttgttcttccaccatcct
aaatttggcatcctcgacgagtgcacaaatgccacgagtgttgatgttgaagagcatttg
tacaggctagcaactagcatgggcataactgtgatcacttcatcacaaaggcctgctctg
atacccttccattcagtggagctaaagctcatcgacggcgagggaaactgggagctctgc
gagatccaacattga
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