Brachypodium distachyon (stiff brome): 100825346
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Entry
100825346 CDS
T01717
Name
(RefSeq) uncharacterized protein LOC100825346
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00240
Pyrimidine metabolism
bdi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
100825346
Enzymes [BR:
bdi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
100825346
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
100825346
NCBI-ProteinID:
XP_003559063
UniProt:
I1GKL1
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Position
1:complement(612941..617878)
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AA seq
328 aa
AA seq
DB search
MSSTAPPRGSPSPVGLAVSPEVEAALACGGAVVALESTIICHGMPYPKNLQTAMEVEAIV
RENGAVPATIAILDGVPHVGLNSEQLERLAISGRQFQKTARRDIAQVVASGGNGATTVSA
TMFFAHKVGIPIFVTGGIGGVHRHGEKTMDISSDLTELGRTPVAVVSAGVKSILDIARTL
EYLETQGVTVVAYRTNEFPAFFTEISGCKVQCRVDSSEECAKIIYANKNMHLASGILIAV
PIPKQHAASGNVIESAIQQALKEADDKKIIGNAITPFILDRVKVLTGGSSLEANIALVKN
NALTGAKIAVALSDLRKRASDGFRRSAL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgacggcgccgccgcggggaagcccgtcgccagtgggattagcggtatctccg
gaggttgaggccgcgctcgcgtgcggcggggccgtcgtcgccctcgagtccaccatcatc
tgccacggtatgccgtacccgaagaacctccagacggccatggaggtggaggccatcgtc
cgggagaacggagctgttccggccaccatagcaattctggatggtgtgccgcatgttggg
cttaacagtgaacagttggagagattggctataagcggaaggcaatttcagaagacagct
agaagggatattgcacaagttgttgcttctggtggcaatggtgctacgacggtttctgcc
actatgttttttgctcacaaggtaggcataccaattttcgtgaccggggggattggaggt
gtgcaccgacatggtgaaaaaaccatggacatctcctctgacttaactgaacttggaagg
actccagtggctgttgtttcagccggcgtgaagtccattttggacatagcacggacactt
gagtacttggaaactcaaggggtaacagttgttgcttacagaaccaacgaatttcctgct
ttcttcaccgaaatcagtggctgtaaggtgcaatgtcgcgttgattcttcagaagagtgc
gccaagataatatatgcaaacaagaatatgcatctagcatctggtattcttattgcagtg
ccaattcccaagcaacacgcagcttcaggaaacgttatagagtctgcaatacagcaagcc
ctcaaggaagcagatgataaaaagataataggaaacgcaatcacccccttcatccttgac
agagtgaaagtactaaccggaggatcttcattggaagccaatattgcacttgtaaagaac
aatgctcttacaggtgctaaaattgccgtagccctttctgatcttcgcaagagagcatca
gatggattccggaggtctgctctgtga
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