Brachypodium distachyon (stiff brome): 100827159
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Entry
100827159 CDS
T01717
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00600
Sphingolipid metabolism
bdi01100
Metabolic pathways
Module
bdi_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
100827159
Enzymes [BR:
bdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
100827159
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
NifW
Motif
Other DBs
NCBI-GeneID:
100827159
NCBI-ProteinID:
XP_003568679
UniProt:
I1HC77
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All DBs
Position
2:complement(2674500..2679092)
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AA seq
542 aa
AA seq
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MEAATNLHLALLRFRAAANQHLAHQEPLFLVAAPLLALLVARAVHAATAHVADRGLRAVV
ISLAMAAVKLVPGVSGYIAAQKSKVVEQLQSGSASTKKNLRTELPAVGIPDGVIKDLQTL
KDKDVKWQGKCSGTVYIAGSESEGHFALINKAYSMFSHTNPLHQDVFKSVAQMEAEVVQM
TAALLGSKEKASGGQICGNMTSGGTESILLAVKTSRDYMQSKKGIKKPEMIIAESAHSAY
DKAAQYFNIKVRRVPVNKDFLADAKGFKRCINGNTIMMVGSAPGFPHGLIDPIEELGELA
SQYGICLHVDLCLGGFVLPFARKLGYPIPPFDFSVKGVTSISTDVHKYGLAPKGTSIVLY
RNHEIRKNQFVAVTEWTGGLYVSPTMAGSRPGGLIAGAWAAMMSVGLNGYLESTGQIMEV
SKKIQKGIEDIPGLFVIGKPDMTVVAFGSDVVDIFEVNDIMSSKGWHLNALQRPNSLHIC
VTLQHVAIYEEFLKDLEDSVNTVKANPGPISGGMAPIYGAAGKMPDRGTVKELLVEFMDT
SC
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggccaccaacctccatctggcgctgctgcgcttccgcgccgccgccaaccag
cacctcgcgcaccaggagccgctcttcctcgtcgccgctccgctcctcgctctcctcgtc
gcccgcgccgtccacgccgctacggcccacgtcgccgaccgcggcctccgcgccgtcgtc
atctctctagccatggccgccgtcaagttggtgccgggggttagcggctacatcgctgct
cagaagagcaaggttgttgagcagttgcaatcaggcagtgcatccaccaagaagaacctg
cgaaccgagctgcccgctgtggggattcccgacggagtcataaaagatctccagacactc
aaagataaagatgtaaaatggcagggaaaatgctccggcactgtttatatcgccgggagt
gagtccgaaggccattttgcattgataaacaaagcctattctatgttttcacacacgaac
ccgctgcatcaggatgtattcaagagtgtggcacagatggaggctgaagtagttcaaatg
acagctgctttgcttggcagcaaagagaaggcgtctggtggacaaatttgtggcaacatg
acatcaggtggaactgaaagcatactattagccgtcaaaacatcacgcgactatatgcaa
tcaaagaagggaatcaaaaaacctgaaatgataattgctgaatcagctcattctgcctat
gacaaagctgctcaatatttcaatattaaggtgcggcgtgtacctgtgaataaagatttt
ctcgcggatgcaaaaggattcaaacggtgcataaatggaaacaccataatgatggttgga
tctgcaccaggatttccacatggtttaattgatcctattgaggaacttggggagttggct
tctcagtatggtatttgcttgcatgttgatctatgccttggtggcttcgtattgcctttc
gcccgtaagcttgggtatcctattcctccttttgacttttctgtcaaaggtgttacatcg
atctcaacggatgttcataagtatgggctagccccaaagggcaccagtattgtcttgtac
aggaatcatgaaattagaaagaaccaatttgtggctgtgactgagtggactggtgggctc
tatgtttcccctactatggctggtagcaggccaggcggactaatcgcaggagcttgggct
gcaatgatgtctgttggattaaatggctatttggaaagtacgggtcaaatcatggaagtc
tcgaagaagatacaaaaaggaattgaagatattccagggttattcgtgattgggaagcca
gacatgacggtcgtggcatttgggtcggatgtcgtcgacatatttgaggtgaatgacata
atgtcatcgaaaggttggcacctcaatgctctgcagagacccaacagcctgcacatctgc
gtgacgcttcaacacgtggcgatttacgaggaattcctcaaggatctggaggattccgtg
aacacggtgaaagcaaatccagggcctatcagcggtgggatggctcctatctacggtgcc
gcagggaagatgccagatagaggcactgtcaaggagttgcttgtggagtttatggacacc
tcttgctaa
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