Brachypodium distachyon (stiff brome): 100833436
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Entry
100833436 CDS
T01717
Name
(RefSeq) protein EXPORTIN 1A isoform X1
KO
K14290
exportin-1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03008
Ribosome biogenesis in eukaryotes
bdi03013
Nucleocytoplasmic transport
bdi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100833436
03008 Ribosome biogenesis in eukaryotes
100833436
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100833436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100833436
03009 Ribosome biogenesis [BR:
bdi03009
]
100833436
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100833436
03036 Chromosome and associated proteins [BR:
bdi03036
]
100833436
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100833436
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100833436
Pre-60S particles
100833436
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100833436
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100833436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
100833436
NCBI-ProteinID:
XP_003559224
UniProt:
I1GKL4
LinkDB
All DBs
Position
1:622407..630950
Genome browser
AA seq
1074 aa
AA seq
DB search
MADKLRDLSQPIDVPVLDATVAAFYGTGSKEERNAADQILRELQNNPDMWLQVVHILQNS
QNLNTKFFALQVLESVIKYRWNALPTEQRDGMKNYVSDVIVQLSSNEASFRQERLYVNKL
NIILVQVLKHEWPARWSSFIPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEMTQLK
IKELKSSLNSEFRLVHELCLYVLSATQSSELIRATLATLHAFLSWIPVGFIFESPLLETL
LKFFPMAAYRNLTLQCLTEVAALQFGDFYDMQYVKMYTIFMMQLQAILPPGPATIPDAYA
NGSNEEQAFIQNLALFFTAFFKNHMRILEASPENRAALLLGLEYLIGISYVDDTEVFKVC
LDYWNVFVLELFEAHNQMEPATAAVSMMGLQAQMIPGVIDGTVTAVQQRRQLYSGPLSKL
RMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEQQM
LKKLSKQLNGEDWSWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHEMHPGVQDMACDTFLKIVQKCK
RKFVTQQVGENEPFVSELLSNLTTTILDLEPHQIHTFYESVGHMIQAESDNTKRDEYLKR
LMSLPNLKWAEIIGQAGQSIDILKNQDVIRSVLNILQTNTSVANSLGPHFFPQISLIFLD
MLTVYRMYSELVSSTIAEGGPYASKSSFVKLLRSIKRETLKLIETFVDKAEDLPHLGKQF
VPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGEMLDDVPRIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIGTHCFQALIQLSSQQLKLVIDSINWAFRHTERNIAETGLSL
LLEILKNFQASAFQNQFYKTYFLNIEQEIFAVLTDSFHKPGFKLHVLVLQHLFCVVDGLT
EPLWDASSVPYQYTDNAMFVRDYTVKLLGASFPNIAPAEVTKFVDGLLSSKHDLPSFKNH
IRDFLVQSKEFSVQDNKDLYAEEAAVQRERERQRMLAIPGLIAPSELQDEMLDS
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaactaagggatctgagccagcccatagacgtcccggtgctggacgccacc
gtcgccgccttctacggcaccggatctaaggaggagaggaatgctgccgatcagatattg
cgggagctgcagaataatcctgacatgtggctgcaagtagtccacattctgcagaattct
cagaacttgaacacaaagttctttgccctccaagtacttgaaagtgttatcaagtacagg
tggaatgcgttgccgactgagcaacgcgatggcatgaagaattacgtatctgatgttatt
gttcagctctcaagtaatgaggcttcctttcgacaagagagactttatgttaataaactc
aacattatattggtgcaggttctgaagcatgagtggccagccaggtggtcatccttcatt
cctgaccttgttgcagcggcaaagagtagtgaaacgatatgtgaaaattgcatggctata
ttaaagcttttaagtgaagaaatttttgatttttcaagaggcgaaatgacacagctgaag
attaaagaactcaagtcttcacttaacagcgaatttcgtcttgtccatgagctttgtttg
tatgtcctatctgcaacacaaagttcggagctgatccgtgctacgttggctacacttcat
gctttcttatcatggattcctgtcggattcatctttgaatcgccattgctggagacgttg
ttgaagttctttcctatggctgcttatcggaaccttacacttcagtgcttaacagaggtt
gctgctcttcagtttggtgatttttatgatatgcagtatgtgaagatgtacacaattttc
atgatgcagttgcaggctattcttcctcctggtcctgcaacgattcccgatgcctatgct
aatggttccaatgaagaacaggcattcatacaaaatctggcgctcttcttcaccgcgttc
tttaagaatcatatgcgtatactggaggcatctccagaaaatagagctgcattactcctg
ggtcttgagtacctcattggaatttcatatgttgatgacactgaggtttttaaggtatgc
ttggattactggaatgtatttgtcttggagctatttgaagcacacaatcaaatggagcct
gcaacagcagctgtaagcatgatgggacttcaggctcagatgatccctggagttattgat
ggtactgttacggctgttcagcaaaggagacagctttactcaggcccactgtcaaaattg
agaatgttgatgatttgtcgtatggcaaagcctgaggaagtattgattgtggaagatgag
aatggcaatattgtacgcgaaacaatgaaagataatgacgtccttgtccagtataagatc
atgagggaaacactgatctatttgtctcatcttgatcatgaggatacagaacaacagatg
ttgaagaaattgagtaagcaattaaatggagaagactggagttggaataacctcaatact
ctctgctgggctatcggatcaatatctggttctatggtggaggaacaggagaatagattt
ttggtaatggtcattcgcgatttgctaaatctctgtgaaatcaccaaggggaaagacaat
aaagctgtaattgcaagcaacatcatgtatgtggttggtcagtatccaagatttctaagg
gctcactggaaatttctgaaaacggtggtcaacaagttgtttgagttcatgcatgagatg
catcctggagttcaggatatggcgtgtgatacttttctgaaaattgttcagaaatgcaag
cgcaagtttgtgacccaacaggtgggcgagaatgaaccatttgtttctgagctgctctcc
aaccttactacaacaattcttgatcttgagccgcaccagattcacactttttatgaatcg
gttggccacatgattcaagctgaatctgataatactaagagggacgaatacctcaagaga
ctgatgagccttcctaatctgaaatgggctgaaataattgggcaggcaggccaaagcatt
gatattctgaagaaccaagatgttatcagatctgtgctgaacatcttacagacaaacaca
agtgttgcaaattcgcttggaccacacttcttcccacaaatttcactaatcttcctggac
atgctgacagtttacagaatgtacagcgagcttgtatcaagcacaattgctgaaggagga
ccttatgcctcgaagtcctcgtttgtaaaactcttgagatctatcaagagggaaacattg
aagttgattgagacctttgtggacaaagccgaagatctaccacaccttgggaagcagttt
gttcctccaatgatggatcctgttcttggagactatgctagaaatgtccctgatgcgagg
gaatctgaagttttgtccctttttgcaactattataaacaagtacaaaggtgaaatgctt
gacgatgtgcctcgtatatttgaagctgttttccagtgtactctcgagatgattactaaa
aactttgaagattatcctgagcaccgccttaaatttttctctttgcttcgtgctattggc
acccattgcttccaagctttaattcagctttcaagtcagcaattgaagcttgttatcgat
tcaatcaattgggcatttagacatacagagagaaacattgctgagactggccttagtctg
ttgctggaaattctgaagaattttcaggcttcagcattccagaatcagttctataaaaca
tattttttgaatatcgagcaagagattttcgcagttctcacagactcattccataagccc
ggtttcaagcttcatgttttggtgctacagcacttgttttgtgtggttgatggtctaact
gagcctctatgggatgcttcctcagtaccataccaatatactgataatgctatgttcgtt
cgagactatactgtaaaacttcttggagcatcatttcctaacattgcgcctgctgaggtg
accaagtttgttgatgggcttcttagttcgaaacatgatcttccaagctttaaaaatcat
ataagagacttcctggtgcagtcaaaggagttctccgtgcaggataacaaggatctgtat
gccgaagaggctgctgtacaaagagagcgggaacggcaacggatgcttgctattccaggg
ctgattgccccaagcgaattgcaagacgagatgttagattcatag
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