Brachypodium distachyon (stiff brome): 100836811
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Entry
100836811 CDS
T01717
Name
(RefSeq) tryptophan synthase alpha chain isoform X1
KO
K13222
indole-3-glycerol-phosphate lyase [EC:
4.1.2.8
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00402
Benzoxazinoid biosynthesis
bdi00999
Biosynthesis of various plant secondary metabolites
bdi01100
Metabolic pathways
bdi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00402 Benzoxazinoid biosynthesis
100836811
00999 Biosynthesis of various plant secondary metabolites
100836811
Enzymes [BR:
bdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.8 indole-3-glycerol-phosphate lyase
100836811
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GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
FMN_dh
Ribul_P_3_epim
ThiG
IGPS
TMP-TENI
PcrB
BtpA
NanE
Peptidase_M19
Motif
Other DBs
NCBI-GeneID:
100836811
NCBI-ProteinID:
XP_003559308
UniProt:
A0A0Q3JKM7
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Position
1:3698656..3701170
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AA seq
344 aa
AA seq
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MAFALKASPSSTSSSSSAPSNHPRLRSAAAMAMPTPGRPASRAVAAASAAASLEPAVVTP
SPDSYWRAPLPLTPAASERIPTVAQAMSRARAHGKTAFIPYITAGDPDLGTTAEALRLLD
ALGADVIELGMPFSDPSADGAVIQASAKRALAAGATTDAVMAMLREVTPELSCPVVIFSY
FNPIVRRGTRSFAAAAREAGVKGLIIPDLPYDEIRAFRKEAIQNSLELVLLTTPATPAER
MKEIAKASEGFVYLVSVVGVTGARANVNPRVKDLLKEIRQVTDKEIAVGFGISTPDHVSQ
ISEWGADGVIIGSAMVKQLGEADSPREGLKRLEAYARSLKNALP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgcgctcaaggcgtccccctccagcacgtcttcttcttcctcggctccgtcg
aaccatccgagactccgtagcgcagcggccatggcgatgcccacgccagggaggcctgcg
tccagggcagtcgcggccgcgtctgccgcggcctcgctcgagccggccgtggtcacgccc
tccccggacagctactggcgggcgccgctcccccttacaccggcggccagcgagcgcatc
ccaacagtggcacaggccatgtcccgagccagagcacacggcaagacggcgttcatcccg
tacatcacggcgggggacccggacctggggacgacggcggaggcgctgaggcttctggac
gccctgggcgccgacgtcatcgagctgggcatgcccttctcggacccctccgccgacggc
gccgtcatccaggcctccgccaagcgggcgctggccgccggcgccaccacggacgccgtc
atggccatgctgagggaggtcacgccggagctgtcctgccccgtcgtcatcttctcctac
ttcaaccccatcgtccgccgggggacccggagcttcgccgccgcagccagagaagccggc
gtcaaaggccttatcatacccgatcttccatacgacgagatacgtgcattcaggaaagaa
gccattcaaaacagtctagagctggtgctccttacaacaccagctacaccagcagagagg
atgaaggaaatcgcaaaagcttcagaagggtttgtttacctggtaagtgtagttggagtt
actggcgcccgtgcaaacgtgaacccgcgtgtcaaggatcttcttaaggagattagacag
gttacagacaaagagatagcagttggcttcggcatatcgacccctgaccacgttagccag
atttcagagtggggtgcagacggggtgataattggcagtgcaatggtgaagcaattgggt
gaagcagattctccaagagaagggctgaagaggttggaagcatatgccaggagtttgaaa
aatgcactgccatga
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