KEGG   Brachypodium distachyon (stiff brome): 100840396
Entry
100840396         CDS       T01717                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03020  RNA polymerase
bdi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100840396
  09124 Replication and repair
   03420 Nucleotide excision repair
    100840396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bdi03021]
    100840396
   03400 DNA repair and recombination proteins [BR:bdi03400]
    100840396
Transcription machinery [BR:bdi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100840396
DNA repair and recombination proteins [BR:bdi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100840396
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom zf-ribbon_3 SR1P DZR
Other DBs
NCBI-GeneID: 100840396
NCBI-ProteinID: XP_003562653
UniProt: I1GS55
LinkDB
Position
1:complement(16739394..16741523)
AA seq 115 aa
MSALKFCRHCNNMLYPREDKETRTLHYVCQSCEHQEVATDTCVYKRVLRKPADEPKDILK
DAATDISSLPRTRSVKCYNCGYPEAAFFQAPSKGEADMVLYFICCSPTCSHRWRD
NT seq 348 nt   +upstreamnt  +downstreamnt
atgagcgccctcaagttctgccgccattgcaacaatatgctgtacccgcgggaggacaag
gaaacgcgcaccctccactacgtttgccagtcctgcgagcatcaggaggttgccactgat
acgtgcgtgtacaagagggttctccgcaaacctgctgatgaacctaaagatatcctaaaa
gatgcagctactgatatttcttcactgcctcgcaccagaagtgttaaatgctacaactgc
ggctatccagaagctgcttttttccaggccccatcgaagggagaggcagacatggtcctg
tacttcatctgctgtagccctacctgttctcacaggtggagggactga

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