Brachypodium distachyon (stiff brome): 104583450
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Entry
104583450 CDS
T01717
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00906
Carotenoid biosynthesis
bdi01100
Metabolic pathways
bdi01110
Biosynthesis of secondary metabolites
Module
bdi_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
104583450
Enzymes [BR:
bdi01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
104583450
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
NAD_binding_8
FAD_binding_3
FAD_binding_2
HI0933_like
Thi4
FAD_oxidored
NAD_binding_9
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
104583450
NCBI-ProteinID:
XP_010233950
UniProt:
I1HY61
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Position
3:complement(4802061..4803919)
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AA seq
491 aa
AA seq
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MATALLLRAHHARNPPPSPSPPARAAIVCRAMAASASASASAQALRSLAPPPRPELLSLD
LPRYDPARSRPVDLAIVGGGPAGLAVAQRVAEAGLSVCSIDPSPGLVWPNNYGVWVDEFE
AMGLADCLDTVWPSASVFIDDATPPKSLDRPYARVARRKLKSTMMDRCVAHGVRFHQAKV
VKAVHNDASSLLICDDGVAVPATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDGHP
FDIDKMLFMDWRDSHLPEGSAVRERNSRVPTFLYAMPFSPTKIFLEETSLVARPGLAMDD
IQERMASRLRHLGIRIRSVEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVAR
TLATAPIVADSIVRFLDSGNGSITGDALAAEVWKELWPTDRRRQREFFCFGMDVLLKLDL
QGTRRFFNAFFDLEPHYWHGFLSSRLYLPELMMFGLSLFAHASNTSKLEIMAKGTVPLAK
MVGNLIQDRDR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcgctcctcctccgcgcgcaccacgcccgcaacccgccgccgtccccttcg
ccgccggcgcgcgccgcgatcgtctgccgggccatggcggcgtcggcgtcggcgtcggcg
tcggcccaggcgctgcgctcgctggccccgccgccgcggccggagctgctctccctcgac
ctgccccgctacgacccggcccgctcccgccccgtcgacctcgccatcgtcggcggcggg
ccggcgggcctcgccgtggcgcagcgggtcgccgaggcgggcctctccgtgtgctccatc
gacccttccccgggcctcgtgtggcccaacaactacggcgtgtgggtggacgagttcgag
gccatgggcctcgccgactgcctcgacaccgtctggccctccgcctccgtcttcatcgac
gacgccaccccgcccaagtccctcgaccgcccctacgcccgcgtcgcccgccgcaagctc
aagtccaccatgatggaccgctgcgtcgcgcacggcgtccgcttccaccaggccaaggtc
gtcaaggccgtccacaacgacgcctcctccctcctcatctgcgacgacggcgtcgccgtc
ccggccaccgtcgtcctcgacgccaccggcttctctcgctgcctcgtgcagtacgacaag
ccatacaacccgggctaccaggtcgcatacggcatcctcgccgaggtcgacggccacccg
ttcgacatcgacaagatgctcttcatggactggcgcgattcccacctccccgaggggtcc
gcggtcagggagcggaacagccgggtgcccacgttcctctacgccatgccattctccccc
acgaagatcttcctcgaggagacgtcgctggtggcgcgcccgggcctcgccatggacgac
atccaggaacgcatggcctcgcggctcaggcatctggggatacgcatccggagcgtcgag
gaggacgagcgctgcgtgatccccatgggcgggccgctgcccgtgctgccgcagagggtg
gtcggcatcggtggcacggccgggatggtgcacccttccacggggtacatggtggcgcgc
acgctggccacggctcccatagtggcagactccattgtgcggtttcttgattccggcaat
ggcagcatcaccggggatgcgctcgccgccgaggtgtggaaggagctctggccgacagac
aggcggaggcagagggagtttttctgcttcggcatggacgtcctgctcaagctggacctc
caaggtacacgccggttcttcaacgccttcttcgacctcgagccgcattactggcacggc
ttcctttcgtccaggttgtacctgccagagctcatgatgtttgggctctcgctgtttgcc
cacgcttccaacacgtcgaagctagagatcatggccaagggcaccgtgcctcttgccaag
atggtaggcaacttgatacaagacagagataggtga
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