Bdellovibrio sp. KM01: HW988_18705
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Entry
HW988_18705 CDS
T08445
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bdk
Bdellovibrio sp. KM01
Brite
KEGG Orthology (KO) [BR:
bdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdk03009
]
HW988_18705 (rimO)
Enzymes [BR:
bdk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HW988_18705 (rimO)
Ribosome biogenesis [BR:
bdk03009
]
Prokaryotic type
ribosomal protein modification factors
HW988_18705 (rimO)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
ALS2CR8
CLP1_P
CDT1_C
Motif
Other DBs
NCBI-ProteinID:
QLY25411
UniProt:
A0A7H9MJI9
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All DBs
Position
complement(3882627..3884000)
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AA seq
457 aa
AA seq
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MKQETVENKKVHFISLGCPKNLVDSEIMAGTLMKDGFQVVGEAEEADTVIVNTCGFIEDS
KKESIQRILDMSDLKQQGKVKKVVVAGCLTQRYKDDLVEGLPEADLFVGSGEFQNISKIL
KNSEAGEKQKTFFNLPTYLQEEATPRVNSQPGHRAYLKISEGCMKRCAFCAIPLIRGNLQ
SRSIDAIVAEAKLLVAGGVKELIIISHDFTDYGWDIRRKDPTRKESPVELLKALEHVEGL
QWIRLMYLYPDGITQEMVQVIKNSKKIVRYFDMPLQHVNDAVLKSMNRKMTRDEIETALM
NIREHLPEAVIRTQFIVGFPGETEEQFEELLNFVAEQQFDRVGCFKYSPEENTPGGRMDN
QVDDETKDYRHDALMEVQQNISRNKHRDFVGKTIEVIVEGFSEETDLLLQGRFWGQAPDI
DGVVLINDGEAKVGDMVKVHVTDSMEYDLIGEIVTEN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagaaacagttgaaaacaaaaaagtacactttatcagcttgggttgccctaag
aatctcgtagattccgagatcatggcgggaactctaatgaaagatggcttccaagttgtg
ggcgaggctgaagaagctgacacagttatcgtgaacacttgtggtttcatcgaagattct
aaaaaagaatctatccagcgcattttggatatgagtgatcttaagcaacaaggcaaagtt
aaaaaagttgttgtcgctggttgcttaactcaacgctataaggacgaccttgttgaaggt
ttgccagaggcggatttgttcgtgggttctggtgagttccaaaacatctctaaaatcttg
aagaactctgaagctggtgaaaaacaaaaaactttcttcaatcttccaacatatcttcag
gaggaagcaactccgcgcgtgaactctcaaccgggtcaccgtgcgtatttgaaaatctct
gaaggttgcatgaagcgttgtgcattctgcgcgattcctttgatccgtggtaacttacaa
tctcgttctatcgacgctatcgttgctgaagctaaattgttggttgctggcggagttaaa
gagctgatcattatcagccatgacttcactgactacggctgggacatccgccgtaaagat
ccaactcgtaaagaaagccccgtggagcttttaaaagcccttgagcacgttgaaggtctt
cagtggatccgtttgatgtacttgtatccagatggcatcacacaagagatggttcaagtt
atcaaaaacagcaaaaaaatcgttcgctattttgatatgccacttcaacacgtaaatgat
gcggttcttaaatcaatgaatcgcaaaatgactcgtgatgaaatcgaaacggcgttgatg
aacatccgtgaacacttgcctgaagctgtgatccgtacacaatttatcgttggtttccct
ggtgaaactgaggagcaattcgaagagcttttaaacttcgtggctgaacagcagttcgac
cgtgttggttgcttcaagtattctcctgaagaaaacactccaggtggccgtatggacaac
caggttgatgacgaaactaaagactaccgtcacgacgctttgatggaagttcaacaaaat
atttctcgtaacaagcaccgtgatttcgtaggtaaaactatcgaagtcattgtggaaggt
ttctctgaggaaactgatttgcttcttcaaggtcgtttctggggtcaagctccggatatt
gacggcgttgtattgatcaacgacggtgaagctaaggtcggcgatatggttaaagtccat
gtgacagattcaatggaatacgaccttatcggtgaaatcgtcactgaaaactaa
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