Burkholderia dolosa: AK34_2122
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Entry
AK34_2122 CDS
T03793
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bdl
Burkholderia dolosa
Pathway
bdl00540
Lipopolysaccharide biosynthesis
bdl01100
Metabolic pathways
bdl01250
Biosynthesis of nucleotide sugars
Module
bdl_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bdl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AK34_2122 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bdl01005
]
AK34_2122 (rfaD)
Enzymes [BR:
bdl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
AK34_2122 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bdl01005
]
Core region
AK34_2122 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
KR
DapB_N
adh_short
Motif
Other DBs
NCBI-ProteinID:
AJY13162
LinkDB
All DBs
Position
1:complement(2285105..2286097)
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AA seq
330 aa
AA seq
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MTIIVTGAAGFIGANIVKALNERGETRIIAVDNLTRADKFKNLVDCEIDDYLDKTEFVER
FARGDFGNVRAVFHEGACSDTMETDGRYMMDNNFRYSRAVLDACLAQRAQFLYASSAAIY
GGSTRFVEERDVEAPLNVYGYSKFLFDQVIRRVLPSAQSQIAGFRYFNVYGPRETHKGRM
ASVAFHNFNQFRAEGKVKLFGEYNGYAPGEQTRDFVSVEDVAKVNLFFFDHPEKSGIFNL
GTGRAQPFNDIASTVVNTLRALDNLPPLTLAQQVEQGLIEYVPFPDALRGKYQCFTQADQ
TKLRAAGYDAPFLTVQQGVDRYVRWLSGQV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatcgtcaccggcgcagccggttttatcggcgcgaacatcgtcaaggcgctc
aacgagcgcggcgagacgcgcatcatcgcggtcgacaacctgacgcgcgcggataaattc
aagaatctcgtcgattgcgagatcgacgactatctcgacaagaccgaattcgtcgaacgc
ttcgcgcgcggcgacttcggcaacgtgcgcgcggtgttccacgaaggcgcctgttcggac
acgatggaaaccgacggccgctacatgatggacaacaacttccgctacagccgcgcggtg
ctcgacgcctgtctcgcgcagcgtgcacagttcctgtacgcgtcgtcggctgcgatctac
ggcggctcgacgcgcttcgtcgaggagcgcgacgtcgaggcgccgctgaacgtgtacggc
tattcgaagttcctgttcgaccaggtgatccgtcgcgtgctgccgagcgcgcagagccag
atcgcgggctttcgctatttcaacgtgtacggcccgcgcgagacgcacaaggggcgcatg
gcgtcggtcgcgttccacaacttcaaccagttccgcgccgaaggcaaggtgaagctgttc
ggcgagtacaacggctacgcgccgggcgagcagacgcgcgacttcgtgtcggtcgaggac
gtcgcgaaggtgaacctgttcttcttcgatcatccggagaagtcgggcatcttcaatctc
ggcaccggccgcgcgcagccgttcaacgacattgcgtcgaccgtcgtcaatacgctgcgc
gcgctcgacaacctgccgccgctcacgctcgcgcagcaggtcgagcaggggctgatcgaa
tacgtgccgttccccgacgcgctgcgcggcaagtaccagtgcttcacgcaggccgatcag
acgaagctgcgcgcggccggctacgatgcgccgttcctgaccgtgcagcaaggtgtcgac
cgttacgtacgttggctgtccggccaggtttaa
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