Bdellovibrio sp. qaytius: CIK05_15640
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Entry
CIK05_15640 CDS
T05880
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bdq
Bdellovibrio sp. qaytius
Brite
KEGG Orthology (KO) [BR:
bdq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdq03009
]
CIK05_15640 (rimO)
Enzymes [BR:
bdq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CIK05_15640 (rimO)
Ribosome biogenesis [BR:
bdq03009
]
Prokaryotic type
ribosomal protein modification factors
CIK05_15640 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
ALS2CR8
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AZZ38171
UniProt:
A0A3T0RVY5
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All DBs
Position
complement(3264814..3266196)
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AA seq
460 aa
AA seq
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MSQKITTENAPKKVHFISLGCPKNLVDSEIMAGTLMKDGYEVVADAEDADTVVVNTCGFI
EDSKKESIQRILDMTALKESGQIKKVVVAGCLTQRYKDELVEGLPEADLFVGSGEFQNIA
KILKSHDAGDKKKTFFNLPTYLQEEATPRVNSQPKHRAYLKISEGCMKRCAFCAIPLIRG
NLQSRTISNIVNEAKLLAAGGVKELIIISHDFTDYGWDLRRKDPTAKESPVELLKALAEV
DGIQWIRMLYLYPDGITQELIDVMKSSKKFVKYFDMPLQHINNDVLKKMNRKMTREEIET
ALTRIRTEIPDAVIRTQFIVGFPGETAENFEELLKFVADQKFDRVGCFKYSPEENTPGGK
MTDQIEEHIKDFRHDALMSIQQNISKVKHEAFIGKTVEVLVEGYSEETELLLQGRTSQQA
PEIDGVVLINDGLAKIGDIVQVQITESMEYDLIGGIVELA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaaaataacaactgaaaatgctcctaaaaaagttcactttatcagcttaggt
tgccctaagaacttagtggatagcgaaatcatggccggtacattaatgaaagacggttac
gaagttgtagctgacgcagaagatgctgacactgtggttgtaaacacttgtggttttatc
gaagattctaaaaaagaatctatccaaagaattttggatatgacggcattaaaagaatca
ggccaaatcaaaaaagttgttgtggctggttgtttaactcaacgttataaagacgaatta
gttgaaggtttgcctgaagctgacttattcgtaggtagcggcgaatttcaaaatatcgct
aagattttaaaaagccacgatgcgggcgataagaaaaaaactttctttaacttgcctaca
tacttacaagaagaagctactccgcgtgtaaattcacaacctaaacacagagcctattta
aaaatctctgaaggttgcatgaagcgttgtgcattctgcgcgatcccgttaattcgtggt
aatttacaatctcgcacaatttctaacatcgttaacgaagctaagttattagctgctggc
ggagttaaagaattaattattatcagtcatgatttcacagattacggttgggatttacgt
cgtaaagaccctacagctaaagaatctccagttgagttattaaaagctttagctgaagtt
gacggtatccaatggattcgtatgttgtatttatatccagatggaatcactcaagaactt
atcgacgtgatgaagtcgagcaaaaagttcgtgaagtattttgatatgcctttgcagcac
atcaacaacgacgttcttaaaaaaatgaatcgtaaaatgactcgcgaagaaatcgaaaca
gcgttaactcgcattcgcactgaaattcctgatgcagttattcgtacgcaatttatcgtg
ggctttccgggcgaaacggctgaaaattttgaagagttgttaaaattcgtagctgatcaa
aaatttgaccgcgttggttgttttaaatattcacctgaagaaaatactccaggtggcaaa
atgactgatcaaatcgaagagcacatcaaagacttccgtcacgatgctttaatgtctatt
cagcaaaatatttctaaagttaaacacgaagccttcattggtaaaacagtcgaagtttta
gttgaaggttacagcgaagaaactgaattgttattacaaggccgcacatcacaacaagct
cccgagatcgatggcgttgtattaattaatgatggtttagctaaaatcggcgatatcgtt
caagtgcaaatcactgaaagtatggaatacgatcttatcggcggaatcgtagaactagcg
taa
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