Barrientosiimonas endolithica: GCM100_32290
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Entry
GCM100_32290 CDS
T09132
Symbol
lysS_2
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
bei
Barrientosiimonas endolithica
Pathway
bei00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bei00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GCM100_32290 (lysS_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bei01007
]
GCM100_32290 (lysS_2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bei03016
]
GCM100_32290 (lysS_2)
Enzymes [BR:
bei01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GCM100_32290 (lysS_2)
Amino acid related enzymes [BR:
bei01007
]
Aminoacyl-tRNA synthetase
Class I (A)
GCM100_32290 (lysS_2)
Transfer RNA biogenesis [BR:
bei03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GCM100_32290 (lysS_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
zf-CSL
tRNA-synt_1b
tRNA-synt_1g
Motif
Other DBs
NCBI-ProteinID:
BDZ59572
LinkDB
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Position
complement(3076765..3078573)
Genome browser
AA seq
602 aa
AA seq
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MTYALAGPVESALVTEQLDDWVSRLADEVVAEAKRRETPVVCASGISPSGPIHLGNLREV
MVPHLVRDEIRRRGIEAEHIISWDDFDRFRKVPNVEGVDESWAEHIGKPLTSVPPPAGSP
HESWAAHYRSELEGALAELGVDYRGISQTEMYLAGAYTEQILFAMGHRTDIDKVLDQYRT
LARAAQQKEQPQQGELSEDDALAAAEAAEGSGAASEDDGSGAGDYYPYKPYCTVCGTDFT
TVTDYDDATTELTYTCRCGHTERVVLRDFRRGKLVWKVDWPMRWAYERVVFEPSGVDHQS
PGSSFAVGLELAPLFGWDRPLGPMYAFVGIRGMAKMSSSKGGVPTPAQALRYLEPSVLRW
LYARKRPNQAFDVALDAEIQRTYDEWDGLARKVATGKAQAGDVAVLARARTTAAGELPQT
PVPLAYRTIASVVDITTGDDDQTLRILSALDPEQRVTGLDVLRPRLDRASQWVAEQVPAE
DRTIVREQPDREALQRLSAEERRSLDLLLDGDGAELGAIDADWSIDGLTHQVYGVPKVMQ
GKSADFRPDRKADPETAAALGQAQREFFRLLYQLLIGRDAGPRLPTLLLAIGPERLRALL
AA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacgccctcgccgggcccgtagaatcggcgctcgtgaccgagcagcttgacgac
tgggtgtcccgcctcgccgacgaggtcgtggccgaggcgaagcggcgggagacccccgtc
gtgtgcgcctcgggcatctcgccctccggccccatccacctcggcaacctgcgcgaggtg
atggtgccgcacctggtgcgcgacgagatccgccgccgcggcatcgaggccgagcacatc
atcagctgggacgacttcgaccggttccgcaaggtgccgaacgtcgagggcgtcgacgag
tcgtgggccgagcacatcggcaagccgctgacctccgtcccgccgccggccggctcgccg
cacgagtcgtgggcggcgcactaccgctccgagctggagggcgcgctcgccgagctcggc
gtcgactaccgcgggatcagccagaccgagatgtatctcgccggcgcctacaccgagcag
atcctgttcgcgatggggcaccgcaccgacatcgacaaggtgctcgaccagtaccgcacg
ctcgcgcgtgccgcccagcagaaggagcagccgcagcagggcgagctcagcgaagacgac
gcgctcgccgcggccgaggccgccgaggggtcgggcgccgcgagcgaggacgacgggtcg
ggggcgggcgactactacccctacaagccctactgcaccgtctgcggcaccgacttcacc
acggtcaccgactacgacgacgccaccaccgagctgacctacacctgccgctgcggccac
accgagcgggtcgtgctgcgcgacttccgccgcggcaagctggtctggaaggtcgactgg
ccgatgcgctgggcctacgagcgggtcgtgttcgagccgtccggcgtcgaccaccagtcg
cccgggtcctcgttcgcggtcgggctggagctggcgccgctgttcgggtgggatcgcccc
ctcggcccgatgtacgccttcgtcggcatccgcggcatggccaagatgtcctcgtccaag
ggcggtgttcccacgcccgcgcaggcgctgcgctatctcgagccgtcggtgctgcgctgg
ctgtacgcccgtaagcggccgaaccaggcgttcgacgtcgcgctcgacgcggagatccag
cgcacctacgacgagtgggacgggctggcgcgcaaggtcgccaccggcaaggcgcaggcc
ggtgacgtggcggtgctcgcgcgggcccgcacgacggccgccggtgagctgccccagacg
ccggtgccgctggcgtaccgcaccatcgcgtcggtcgtcgacatcaccaccggcgacgac
gaccagacgctgcgcatcctgtcggcgctcgaccccgagcagcgggtgaccggtctcgac
gtgctgcggccgcggctcgaccgcgcgagccagtgggtcgccgagcaggtgccggccgaa
gaccgcaccatcgtgcgcgagcagccggatcgtgaggcgctgcaacggctttcggccgag
gagcggcgcagcctcgacctgctgctcgacggcgacggggccgaactcggcgcgatcgac
gccgactggagcatcgacgggctgacccaccaggtctacggcgtgcccaaggtgatgcag
ggcaagagcgccgacttccgccccgacaggaaggccgaccccgagaccgccgcggcgctc
ggccaggcgcagcgggagttcttccggctgctctaccagctgctgatcgggcgcgacgcc
ggcccgcggctgcccacgctgctgctggccatcgggccggagcggctgcgcgcgctgctc
gctgcctag
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