Bacteroides fragilis BOB25: VU15_08765
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Entry
VU15_08765 CDS
T03897
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
bfb
Bacteroides fragilis BOB25
Pathway
bfb00260
Glycine, serine and threonine metabolism
bfb00630
Glyoxylate and dicarboxylate metabolism
bfb00785
Lipoic acid metabolism
bfb01100
Metabolic pathways
bfb01110
Biosynthesis of secondary metabolites
bfb01200
Carbon metabolism
Module
bfb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bfb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VU15_08765
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VU15_08765
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VU15_08765
Enzymes [BR:
bfb01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
VU15_08765
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AKA51792
UniProt:
A0A149NC10
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Position
complement(2221202..2224051)
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AA seq
949 aa
AA seq
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MKTDLLACRHIGVNKADAEVMLRKIGVASLDELIDKTIPANIRLKAPLALPAPMTEYEFA
RHIAELAGKNKLFTTYIGMGWYNTITPAVIQRNVFENPVWYTSYTPYQTEVSQGRLEALM
NFQTAVCDLTAMPLANCSLLDEATAAAEAVTMMYGLRSRNQQKAGANVVFIDENIFPQTL
AVITTRAIPQGIEIRTGKFRDLEFTDDLFACVLQYPNANGNAEDYREFTEKAHTANCKVA
VAADILSLALLTPPGEWGADIVFGTTQRLGTPMFYGGPSAGYFATRDEYKRNMPGRIIGW
SKDKYGKLCYRMALQTREQHIKREKATSNICTAQALLATMAGFYTVYHGQEGIRNIASRI
HSITVFLEKSIGKLGFKQVNKQYFDTLRFILPDSVSAQQIRTIALSKEVNLRYFDNGDVG
LSIDETTDVAAANILLSIFAIAAGKDFQKVDDIPEATIISEELKRQTPYLTHEVFSKYHT
ETEMMRYIKRLDRKDISLAQSMISLGSCTMKLNAAAEMLPLSCAEFMCMHPLVPEDQAAG
YRELIHNLSEELKVITGFAGVSLQPNSGAAGEYAGLRTIRAYLESIGQGHRNKVLIPASA
HGTNPASAIQAGFTTVTCACDEHGNVDMDDLRAKAEENKDDLAALMITYPSTHGIFETEI
VEICQIIHACGAQVYMDGANMNAQVGLTNPGFIGADVCHLNLHKTFASPHGGGGPGVGPI
CVAEHLVPFLPGHGLFGNSQNEVSAAPFGSAGILPITYGYIRMMGAEGLTMATKTAILNA
NYLAACLKDTYGIVYRGANGFVGHEMILECRKVYEETGISENDIAKRLMDYGYHAPTLSF
PVHGTLMIEPTESESLSELDNFVLTMLTIWNEIQEVKNGEADKEDNVLINAPHPEYEVVS
DQWEHCYTREKAAYPIESVRENKFWVNVARVDNTLGDRKLLPTCYGCFD
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgatttattagcctgccgccacatcggcgtcaacaaagcggatgccgaagta
atgctccggaaaattggagttgcttcgctcgacgaactgatcgataaaaccattccggcc
aacatccggctcaaagcacctctggcactacccgcaccgatgaccgaatacgagtttgcc
cgccacatcgctgaactggcaggcaaaaacaaactgttcaccacttatatcggtatggga
tggtacaacacgatcaccccggcagtcatccagcgaaatgtattcgagaatccggtctgg
tatacttcttatactccttaccagacagaagtttcgcaaggaagactggaagccctgatg
aacttccaaactgccgtatgtgacctgaccgccatgcccttggccaactgttcactgctg
gacgaagccaccgctgccgccgaagctgtgacgatgatgtatggcttgcgttcacgcaac
cagcagaaggcgggagccaacgtggtgtttatcgacgaaaatatcttcccgcagaccttg
gcggtcatcaccactcgcgccatcccgcaaggcattgaaatccgtaccggaaagttccgg
gatcttgaatttacagatgacctctttgcctgcgtcctgcaatatcccaatgcaaacggt
aatgcggaagactaccgcgaatttaccgaaaaagcacatacagccaactgcaaggtagct
gtggctgccgatatcctgagtcttgcactacttacccctccgggcgaatggggagcggac
attgtattcggtaccacacaacgtttgggtactcccatgttctacggtggtccttcggcc
ggttatttcgctacccgcgacgaatacaaacgcaacatgccgggacgtatcatcggatgg
tcgaaagataaatatggcaaactctgttaccgcatggcactccagacacgcgaacagcat
atcaaacgggaaaaagcgacttccaatatctgtaccgctcaggcactgctcgctaccatg
gcaggattctataccgtctatcacggacaggaaggtatccgtaacatcgcttcacgcatc
catagcattaccgttttcctggaaaagagtatcggtaaactgggattcaagcaagtgaac
aaacagtatttcgatactctccggttcattttgcccgacagcgtatcggcacagcagatt
cgcaccatcgctctgagcaaagaggtgaacctgcgctattttgataatggagacgtggga
ctgagtattgacgaaacaaccgacgtagcagctgccaacattctactgtctatctttgcc
atcgctgccggaaaagacttccagaaagtggatgacatccccgaagcaactatcatcagc
gaggaattgaaacgccagaccccttacctcacacacgaagtattctctaaatatcatacc
gaaacggaaatgatgcgctacatcaagcgtctcgaccggaaggatatttcattggcacaa
tcgatgatttcactcggttcctgcaccatgaaactgaatgcggcagccgaaatgttacct
ctgagctgtgctgagtttatgtgcatgcacccgcttgttccggaggatcaggcggccgga
taccgcgaactgattcacaacctgagtgaagagctgaaagtcatcaccggatttgccgga
gtaagcctgcaacccaattccggtgctgccggtgagtatgccggtctgcgcaccatccgt
gcctatcttgaaagcattggacaaggacaccgcaacaaagtattgatccccgcatctgca
cacggcaccaatcccgcatcagccatccaggccggattcaccactgtaacttgtgcatgt
gacgaacatggaaacgtagatatggatgacctccgtgccaaagctgaagaaaataaggat
gacctggccgcactgatgatcacctatccctcgacacacggtatctttgaaacggaaatc
gtagagatctgccaaatcattcacgcctgtggagctcaggtatatatggatggagccaac
atgaatgcacaggtaggactgacgaatccgggatttatcggagcggacgtctgtcacctg
aatctgcataaaacctttgcatctccccacggaggaggcggccccggcgtaggtccgatc
tgtgtagcggaacatctggtaccgttccttccgggacacggactgtttggcaactcacag
aacgaagtatccgccgcaccgtttggcagtgccggtattctgcctatcacctacggctat
atccgtatgatgggtgccgaaggactgacaatggcaaccaagacagccattctcaatgca
aactatctggctgcttgcctgaaagatacgtatggcattgtataccggggagccaacggc
tttgtgggacacgagatgattctggaatgtcgcaaggtatacgaagaaaccggtatcagc
gaaaatgatattgccaaacgcctgatggactacggctatcatgctcctaccctctccttc
cccgtgcacggcacactgatgatcgagcccactgaaagcgaaagcctctccgaactggat
aacttcgtccttacgatgttgaccatctggaacgaaattcaggaagtgaaaaacggtgaa
gccgataaggaagacaatgtactgataaatgctccgcaccctgaatatgaagtagtaagc
gatcagtgggaacactgctatacgcgtgaaaaagccgcatatccgatagagagtgtgcgt
gagaataagttctgggtaaatgtagcccgtgtagataatacgctgggcgaccgcaaactg
ctgcccacatgctacggctgcttcgactga
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