Paraburkholderia fungorum: OI25_3130
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Entry
OI25_3130 CDS
T03799
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn00300
Lysine biosynthesis
bfn01100
Metabolic pathways
bfn01120
Microbial metabolism in diverse environments
bfn01230
Biosynthesis of amino acids
Module
bfn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OI25_3130 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bfn01002
]
OI25_3130 (dapE)
Enzymes [BR:
bfn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
OI25_3130 (dapE)
Peptidases and inhibitors [BR:
bfn01002
]
Metallo peptidases
Family M20
OI25_3130 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
LPD30
Motif
Other DBs
NCBI-ProteinID:
AJZ58730
LinkDB
All DBs
Position
1:complement(3510695..3511834)
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AA seq
379 aa
AA seq
DB search
MSGTLALTEQLIARASVTPDDQHCQRLLIERLSALGFEHETIESNGVTNLWAVKRGVDGT
RGKLLAFAGHTDVVPTGPLEQWHSAPFEPTHRDGKLYGRGAADMKTSIAGFVVASEEFVA
AHPAHRGSIAFLITSDEEGPATDGTVKVVEALQARGERMDYCIVGEPTSSAQFGDMVKNG
RRGSMSGTLIVKGVQGHIAYPHLAKNPVHLLAPALAELVAERWDDGNEYFPPTTWQVSNI
HSGTGATNVIPGHADVMFNFRFSTASTVEGLQARVHAILDRHGLAYDLKWSVSGLPFLTP
RGDLSNALAKAIKDETGVTTELSTTGGTSDGRFIARICEQVIEFGPLNASIHKIDEHIEV
AHIEPLKNVYRRVLEQLIA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcaccctcgcccttaccgaacaactgatcgcacgcgcctctgtgacgcctgat
gaccagcactgccagcgtctgctgatcgaacgcctgtccgcgctcggcttcgagcacgag
acgatcgaatcgaatggcgtgaccaacctgtgggccgtcaaacgcggcgtcgacggcacg
cgcggcaagctgctcgccttcgccggccacacggacgttgtgccgaccggcccgctcgaa
caatggcactcggcgccgttcgagccgacccatcgcgacggcaagctctacggccgcggc
gcggcggacatgaagacgtcgattgccggcttcgtggtggcgagcgaggagttcgtcgcg
gcgcaccccgcgcatcgcggctcgatcgcattcctgattaccagcgacgaagaaggtccc
gcgaccgacggcaccgtcaaggttgtcgaagcgctgcaggcgcgcggcgagcgcatggac
tactgcatcgtcggcgaaccgacctcgagcgcgcagttcggcgacatggtgaagaacggc
cggcgcggttcgatgtcaggcacgctgatcgtcaagggcgtgcaagggcatatcgcctac
ccgcatctggcgaaaaacccggtgcacctgctcgcgcccgcattggccgaactggtggcc
gaacgctgggacgacggcaacgaatatttcccgcccaccacctggcaggtttcgaacatt
catagcggcaccggcgcgaccaacgtgatccccggtcacgcggacgtgatgttcaacttc
cgcttctcgacggccagcacggtggaaggcctgcaggctcgcgtccatgcgatcctcgac
aggcacggtctcgcatacgacctgaaatggagcgtgagcggcctgccgttcctcacgccg
cgcggcgatctgtcgaacgcgctggccaaagcgatcaaggacgaaaccggcgtcacgacg
gagctgtcgaccaccggcggcacctcggatggccgcttcattgcccgcatctgcgagcag
gtaatcgaattcggcccgctgaacgccagcatccacaagatcgacgaacatatcgaagtc
gcacacatcgagccgctgaagaacgtgtatcgccgcgtgctcgaacaactgatcgcctga
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