Paraburkholderia fungorum: OI25_6917
Help
Entry
OI25_6917 CDS
T03799
Name
(GenBank) diguanylate cyclase domain protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
bfn
Paraburkholderia fungorum
Pathway
bfn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bfn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OI25_6917
Enzymes [BR:
bfn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
OI25_6917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_8
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AJZ62489
LinkDB
All DBs
Position
2:complement(3285627..3287630)
Genome browser
AA seq
667 aa
AA seq
DB search
MNDDQHDQVLFAQFGTSSPCWRLSNDSNALELTPVSGDVPANVAIPLNPQQASQIRCLTG
ITSHLVLDVRLFGEPLRLHLVGKKLASNTWAGTASAYDDTESVARDLVHGLSFAEQVVSE
VNSVVVIVDRHGRIQRFNRLAEELTGVKEEDIVGRNVWALFMSTESGAASSQNIAGFFNR
GVSYEVERRVKTLRGERLFLFRNKFVHSGSGVDEQFLICSGTDITEERLAQDRLTELANT
DSLTGLANRNAIQDKIRTAIEDAAPGESVGVLFLDLDNFKKVNDHYGHVFGDRLICDVSS
AIHACLNEGDALARLGGDEFIVLATRCTAHDLEATAQRILERLRTPFSLGLVEVYTGCSI
GIALYPEHGDNLESLIRSADTAMYVAKDEGKRTYRVFSPDMNRKVAEYMWLDTNLRRGLE
EGQLTLHYQPKLSLATGVVQGAEALVRWNSPERGQIMPAEFIRYAEESGLIGVLGRWVME
TAARQAAKWKADGYNLRIAINVSARQLVDTAVVRHFSEALQCANLDPCLIDLELTESCLI
EDEAAAIDLITQFRQLGAQVHLDDFGTGYSSLSQLGRIPLDVIKLDRSFVRSINADTKAQ
ALVRSMVAVAQELNFKVVAEGIETEAEEVFMKGLGVDYVQGFLYGQAMPAAEFERWLQDR
QKLRLIA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaccaacacgatcaggtgctttttgcgcagttcggcacaagcagcccttgc
tggcgtttgtcgaacgacagcaacgcattggaactcacgccggtcagcggcgacgtgccg
gctaacgtcgcaattccgctgaatccccagcaggcctcgcaaatccgctgcctcaccggc
atcacttcgcacctcgttctcgacgtgcggctgttcggcgagccgctgcgcctgcacctc
gtcggaaaaaaactcgccagcaatacctgggcaggcaccgcttcggcctacgacgatacg
gagtccgtcgcacgcgatctggtccacggcctgtcgttcgccgaacaggtcgtctccgaa
gtcaattcggttgtggtcatcgtcgacagacacggccgtatacagcgctttaaccgcctt
gccgaggagctcaccggcgtcaaggaagaagacattgttgggcgcaatgtgtgggcgttg
ttcatgagcactgaatctggcgcggcatcgagccagaacatcgcgggcttcttcaatcgc
ggcgtctcgtacgaagtcgagcggcgcgtgaaaaccctgcgcggcgaacggctctttctg
tttcgcaacaagttcgttcacagcggcagcggtgtcgacgaacagtttctgatctgctcg
ggcaccgacatcaccgaagaacggcttgcgcaggaccggctcactgaactggcgaacacc
gattcgctcaccggcctcgccaatcgcaatgcgatccaggacaagatccggactgcgata
gaagatgcggcgccaggcgaatcggtcggcgtgctgttcctcgatctcgacaacttcaag
aaggtcaacgaccactacggccacgttttcggcgaccggttgatctgcgacgtgtcctcg
gcgatccacgcctgcctgaacgaaggcgacgcgctcgcgcgcctcggcggcgacgagttc
atcgtgctcgccaccaggtgcaccgcccatgatctcgaagcaaccgcgcaacgcattctc
gaacgcctgcgcacgccgtttagcctggggctcgtcgaggtctacaccggctgctcgatc
ggcatcgcgctatatccggagcacggcgacaacctcgaatcgctgatccgttccgcggac
acggcaatgtacgtcgccaaagacgaaggcaagcgcacctatcgcgtgttttcgcccgac
atgaaccgcaaggtggcggagtacatgtggctcgataccaacttgcggcgcggcctcgaa
gaaggccagttgaccctgcactatcaacccaagctctcgctcgccaccggcgtggtgcaa
ggcgcggaggcgctggtgcgctggaactcgcccgagcgcgggcagatcatgccggcggag
ttcatccgctatgcggaggaatccggcctcatcggcgtgctcggccgctgggtcatggaa
acagccgcgcggcaagccgccaagtggaaggccgacggctataacctgcgcatcgcgatc
aacgtgtcggcacggcaactggtcgataccgccgtggtgcgccatttcagcgaagcgctg
caatgcgcgaatctcgatccctgcctgatcgatctggagctcaccgagagctgcctgatc
gaggacgaggcggcggcgatcgatctgatcacgcagttccgccaactcggcgcacaggtt
cacctggacgatttcggcaccggctactcgtcgctctcgcaactgggccgcattccgctc
gacgtcatcaagctcgaccgcagtttcgtccgctcgatcaatgccgacaccaaggcgcag
gccctggtgcgctcgatggtggcggtcgcgcaggaactgaatttcaaggtggtcgccgaa
ggcatcgaaaccgaggccgaagaggtgttcatgaaggggctgggcgtcgactacgtgcag
ggctttctgtatggtcaggccatgccggccgcggagttcgaacgctggttgcaggatagg
cagaagctcaggctgattgcctga
DBGET
integrated database retrieval system
