Branchiostoma floridae (Florida lancelet): 118415678
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Entry
118415678 CDS
T01074
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03020
RNA polymerase
bfo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118415678
09124 Replication and repair
03420 Nucleotide excision repair
118415678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118415678
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118415678
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
118415678
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
118415678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
118415678
NCBI-ProteinID:
XP_035676304
UniProt:
C3Z918
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All DBs
Position
5:17048744..17050773
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPQVHLTELSDENVKFVIEDTDLSMANAVRRIFIAEVPTLAIDWVQLEANSSVLH
DEFIAHRVGLIPLTSDDIVDRMQYSRDCTCAEFCADCAIELTLDVKCTDDQTRHVTTRDL
ISSNPRVVPVTSRRAEDETAGYGEADDILIVKLRKGQELKLRAFAKKGFAKEHAKWNPTA
GVAFEYDPDNALRHTLYPKPEEWPKSEYTELDDETAQAQFNPDGKPNKYYINVESTGALR
PENIVMTGLSILKKKLSDLQTQHSHEIQSDVLTIS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgccaaccagccgcaggtccacctgaccgaactgagcgatgaaaatgtcaaa
ttcgtgatcgaagacaccgacttgtccatggccaacgccgtaaggaggatcttcatcgcc
gaggtgccgactctagccatcgactgggtccagctggaggcaaactcgtcggttctccat
gacgagttcatagcccatcgagtgggtctcataccgctgaccagcgatgacatcgtggac
aggatgcagtactcccgcgactgcacctgcgccgagttctgcgccgactgcgccatcgag
ctgacgctggacgtcaagtgcacggacgaccagacccgccacgtgaccacgcgtgacctc
atctccagtaacccccgcgtggtgcccgtgacgtcacgaagagcagaggacgagacagcg
ggatacggcgaagccgacgacatcctcatcgtgaagcttcgcaagggccaggagctgaaa
ctgcgagccttcgccaagaaggggttcgccaaggagcacgccaagtggaaccccaccgcg
ggtgtcgcgttcgagtacgatcctgacaacgctcttcggcacaccctctatccgaagccg
gaggagtggccaaagagcgagtacacagagctagacgacgagacagcgcaggcacagttc
aacccagacggcaagcccaacaagtactacatcaacgttgagtccacgggggcgctgcgg
ccagagaacatcgttatgacgggactgagtattctgaagaagaaactgagtgacttacag
acgcagcatagtcacgagattcagagtgatgtcctgaccatcagctag
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