Branchiostoma floridae (Florida lancelet): 118416742
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Entry
118416742 CDS
T01074
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K06243
laminin, beta 2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118416742
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Laminin_II
Motif
Other DBs
NCBI-GeneID:
118416742
NCBI-ProteinID:
XP_035677856
UniProt:
A0A9J7MS81
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Position
5:17765888..17820628
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AA seq
1930 aa
AA seq
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MCDVVSLFSGTEKTQGRRKGELSRTCKSCVRVYSARKMWAALAYCVLFLAVSTSAQNCDN
GSCYPATGDLLVGREKNLTASSTCGTQNPTQYCIVSHLQDITKCFICDSRQPYREYYNEN
SHRPENMVTTFTENRRKTWWQSMNGVESVHLQLDLEAEFHLTHLIMTFKTFRPAAMLIER
SSDFGRTWQVYRYFAYNCPESFPGVPQRLPQRIGEVVCISRYSQVEPSTEGEVIYRVLPP
ALEVVDPYSQEVRDLLRITNLRINFTKLHTLGDELLDNRPKIREKYYYAVYDMIVRGNCF
CYGHAETCEPVDGVTPVEGMVHGKCACKHNTKGLNCEACQDFFNDQPWRPARGRETNACK
RCNCNSHSNKCHFDPAVYEQTGRVSGGVCDDCQHNTMGRNCEECKPFYYQDPNKDIRDPN
ICLPCDCDPDGAVNGGECESRTDPANNLVAGRCICKRNVDGERCDRCRGGYWNMRADNPE
GCEATPLVPHKLHADEPESSSWLRQGQPMWPYVPGLRQNGPCQCNPIGTSRDQTCDPRTG
DCICKRHVTGKNCDSCVPGFFGLSDIEEGCRPCDCDPGGAIDSQCNQLDGQCKCRPHMTG
RRCDEVQPGFYAINLDNYKYEAEDALPNGEAQIDMRQCVPGATRTWTGPGFRSMREGSSL
EFTINNIPMSMEYDIVIRYEPQLPDSWDEVGVTLTRPGIIETSSICGNTIPSDDVLSTSL
PPGSRYRVMATPFCLEEMKEYTIKVEFRSYQSGRTNPQAAILFDSLVLVPRYTSVPIFQG
QEGQSRRDEFERYRCQENYLPVLKPQIPPICKSMVRSISAIMHNGGMRTPCNCDVNGAES
TVCDPEGGQCPCRNNVIGQRCDMCCPATFGLGPQGCRACDCDASGSRDLFCNPSNGQCLC
NPGAYGRRCNRCQDNFWNFPNCQRCNCNGHADRCDSVTGSCIDCRDNTAGQFCQTCKDGY
YGDPRLQPGGSQPCRECMCPGGISSGRQFADRCYQDPRSQAVICNCNEGYTGPRCDSCAP
GFYGNPEVPGGSCRRCECNNNIDMTDSSACDSRTGECLKCLYNTEGPRCDRCQAGYYGTA
KDQDCKPVSFQVLSNSLNYEETGLNKLLRKRRETTDLYGHYNQLSRGALGYPFARPRVPL
SSKPRAPLARPGPVPPRPAGPTTRQQPSCVCNMLGTDRTRARCQDGGLCECDRATGQCPC
LPNVVGQQCDRCAPDYWKIASGRGCEACSCDPVNSLSTQCNEFDGQCRCKPGFGGRTCTD
CETNYWGDPRSQCSECNCDPLGSETLQCDRNTGQCRCRPGVTGMKCDQCARGTRGNLPQC
VPCGECFDNWDNIIKGLENETRHELDRAKNIESSGVPGAYDDRFKGIEDDLNAARNLLGG
GLPDGTGVQELEAELDGLKDQLETQDQSLDGIENDLGKASQDIRGANDDLDDLEGRLNNL
NKDVDDFKKDVDRVKNTNTVEALKSIKEAQQKSQDAQAKADGTQPTLGESEQTREEAERL
MAANTGNFGNTDNELKNKIAELENQADMLSLREVNEKVCGDPIDETTPCEQAKCGRAGCY
SGTPQTLKCGGLGCSGALEVANTAKERAEKADAELQKVEDEARRVLDEVRRAKTDADDAK
TSAQNALDRAKEVRDKFKGLDDKVNALLEQISAFLQGEHADPDSVLAVAQEVLAKNIQYT
PQQILDLAKNIDEKVKTLSGVDAILEATENDLKTAQDLLSAAMKAKEDADKVKTTAEEVR
QALDAAEVAQRDAEQAIRDAQGDIDDAEGKLTGIESEISLAVNKINDASAKIAQMNNELT
NEIGPKYTKNQENTKSANDIANAAMKKANDARSQLDDLRAKYEEAQRKVNDQSTPGDTSA
QATKLRQDAAALASEVQKQLTDLQNLKLSFTSQTETLTTKTTDLTELQRRMETILQEITT
KATEYSTCTT
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgatgttgtcagtctgtttagcgggacggaaaaaacacaaggacgacgtaaagga
gagctttcaagaacgtgcaagagttgtgttagagtctacagtgcaagaaaaatgtgggct
gcactagcctactgcgtgctatttctagcagtgagcacgtctgctcagaactgcgacaat
gggagctgctatcctgccacgggcgacctcctggtggggagagaaaagaacctgactgcc
tcgtccacctgtggtacccagaaccccacgcagtactgcatagttagccacttacaggac
atcaccaaatgctttatctgcgactcccgccagccttacagagagtactacaacgagaac
agccaccgccccgagaacatggtcaccacgttcacggagaaccgcaggaagacgtggtgg
cagtccatgaacggcgtggagagcgtccacctgcagctggacctggaggccgagttccac
ttgactcacttgatcatgaccttcaagaccttccgccccgccgccatgctgatcgagagg
tcgtcggatttcgggcgcacgtggcaggtgtacaggtacttcgcgtacaactgtcccgag
agcttccccggagtgccgcagcgactgccgcagaggataggagaagtggtgtgcatctcc
agatactcccaggtcgagccctctactgaaggagaggtcatctatagggtgctgccccca
gccctggaggtcgtcgacccctacagccaggaagtgcgtgaccttctgcgcatcaccaac
ctccgcatcaacttcaccaagctgcacaccctgggagacgagctgctggacaaccggccc
aagatccgcgagaagtactactacgccgtgtacgacatgatcgtcaggggcaactgcttc
tgctacggccacgccgagacctgcgaacctgtggacggagtgactcccgtggagggaatg
gttcatggcaagtgtgcctgtaagcacaacaccaaaggtctgaactgtgaggcctgtcag
gacttcttcaacgaccaaccctggagacccgcgcgtggacgggaaaccaacgcctgcaaa
cgctgtaactgtaacagtcactccaacaagtgtcactttgaccctgcggtgtacgagcag
accgggcgcgtgagtggcggcgtgtgcgacgactgtcagcacaacaccatgggcagaaac
tgcgaggagtgcaaacccttctactaccaggaccccaacaaggacatccgcgaccccaac
atctgtctaccatgtgactgtgaccctgatggtgcggtgaacggaggagagtgcgagagc
cgcacggaccccgccaacaacctggttgccgggcgctgtatctgcaagcgtaacgtggac
ggggaacgctgtgatcgctgcaggggtggatactggaacatgcgagcagacaaccccgaa
ggatgtgaagcgaccccattggtccctcataagttgcatgccgacgaaccggagagcagc
agctggctccgacagggccagcccatgtggccctacgtgcccggtctacgccaaaacggt
ccctgtcagtgcaaccccattggaacgtctcgtgaccagacctgcgacccgcggactgga
gactgcatctgcaagcgccacgtcaccggcaagaactgcgatagctgtgtgcctgggttc
ttcggcctgagcgacatcgaggaaggttgccgaccatgtgactgcgacccgggcggtgca
atcgacagccagtgcaaccagctggatgggcagtgcaagtgccgtcctcacatgaccgga
cgccgctgcgacgaagtccagcctggtttctacgccatcaacctggacaactacaagtac
gaggctgaagacgccctgcccaatggagaggcccagatcgacatgcgtcagtgcgttccc
ggcgccaccaggacgtggaccggccccgggttccggtccatgcgggagggcagcagcctg
gagttcaccatcaacaacatccccatgtccatggagtacgacatcgtgattcgctacgag
ccgcagctgcccgactcctgggacgaggtgggcgtgacgctgacccgcccgggcatcatc
gagaccagcagcatctgtggaaacaccatcccctccgacgacgtcctcagcacctctctc
ccacctggaagcaggtaccgcgtgatggccacacccttctgtctggaggagatgaaggag
tacaccatcaaggtggagttccgctcctaccagagcggccgcaccaacccccaggctgcc
atcctgttcgattcacttgtgctcgtaccgaggtacaccagcgtgcccatcttccaagga
caagagggacagtcgcgtcgggacgagttcgagcgctatcgctgccaggagaactacctc
cccgtgctgaagccgcagatcccacccatctgtaaaagcatggtgcggagcatctccgct
atcatgcacaacggaggcatgcgaaccccatgtaattgtgacgtcaacggcgccgagagc
acggtctgtgatcccgagggagggcagtgcccgtgcaggaacaatgtgattggccaacgc
tgcgacatgtgctgccctgccacctttggcctcggcccacagggatgtagagcttgtgac
tgcgatgccagcggttcccgcgacctgttctgtaaccccagcaatggtcagtgtctgtgc
aaccccggggcttatggccgccgctgcaaccgttgccaggacaacttctggaacttcccc
aactgccagcgctgcaactgtaacggccacgccgaccgctgtgactccgtcacgggctca
tgtatcgactgtagggacaacacggccgggcagttctgtcagacgtgtaaggatggttac
tatggcgacccccgcctgcagcctggtggctcacagccgtgtagggagtgcatgtgtccc
ggtgggatcagcagcggccgccagtttgcggacaggtgctaccaggacccacgcagccag
gccgtcatctgtaactgcaacgagggatacactggtcccagatgcgacagctgtgcacct
ggtttctatgggaacccagaggtgcccggcgggagctgccgcaggtgcgagtgcaacaac
aacatcgacatgaccgactcgtccgcgtgcgacagccgcacgggagaatgcctcaagtgc
ctgtacaatacggagggaccccgctgcgaccgctgccaagcaggctattatggcacggcc
aaggaccaagactgcaagcctgtcagtttccaggtcttgtcaaattccctcaactatgag
gagacaggccttaacaaactgctccgaaagcgaagggaaaccacagatttgtacggtcat
tacaaccagctgtccagaggggctctaggttatccgttcgccaggcctcgagtccccctc
tcctccaagccacgagcccccctcgccaggccagggccagtcccccccaggccagcaggc
cccaccaccagacagcaacctagttgcgtgtgtaatatgctgggaacggaccgcacacgc
gcccgttgtcaggacggaggcctgtgtgagtgtgaccgtgccaccgggcagtgtccgtgt
ctgcccaacgtggttggtcagcagtgcgatcgctgtgcccccgactactggaagatcgcc
agcggaagaggctgcgaggcctgcagctgtgatccggtcaactccctctccactcagtgc
aatgagtttgatggacagtgtcgctgcaagcccggattcggaggacgtacctgcacagac
tgcgagaccaactactggggagacccacgatcccagtgctcggaatgtaactgcgatcct
ctgggttcggagacgctgcagtgcgacaggaacaccggccagtgtcgctgccgccctggt
gttaccggcatgaagtgcgaccagtgtgcccgcggcaccagggggaacctcccacagtgt
gtgccctgtggagaatgcttcgacaactgggacaacatcatcaagggcttggaaaatgag
accagacacgaacttgatcgtgcaaagaacatcgagtcatccggtgtgccgggtgcgtac
gacgacaggttcaagggcatcgaggatgacctgaacgcagcgagaaacctgctgggcggc
ggtcttccggacggaaccggtgtccaggaactggaggctgaactggacgggctgaaggac
caacttgaaacccaggaccagtctcttgatggcattgagaacgaccttgggaaagcctct
caggacatcaggggggctaacgatgaccttgacgacttggagggtcggttgaacaacttg
aacaaagatgttgacgactttaagaaggatgtggacagggtgaagaacacaaacactgtc
gaggctctcaagagcatcaaggaagcccagcagaagtcccaggatgcccaggcgaaggct
gacggcacgcagcccaccctcggagagtccgagcagactcgcgaggaggcggagaggctc
atggcagctaacaccggaaactttggcaacaccgacaatgagctgaagaacaagatcgct
gagctggaaaaccaggccgacatgctcagtttgagggaggttaatgagaaggtgtgtgga
gatcccattgacgagaccacgccctgcgagcaagccaagtgcggccgtgctggctgctac
tccggcactccacagaccctgaagtgtggaggcctgggctgctcgggtgccctggaggtg
gccaacacggccaaggagcgtgccgagaaggcagatgctgaactgcagaaggtggaggat
gaagccaggcgcgtgctggacgaggtgcgccgtgccaagactgacgcagatgacgccaaa
acatccgcccagaatgcacttgaccgtgctaaggaagtccgtgacaagttcaaaggtctt
gatgacaaggtgaacgccctcctggaacagatcagcgccttcctccagggcgagcacgcc
gacccagacagtgtcctcgctgtggcccaggaggttctagccaagaacatccagtacacc
ccgcagcagatccttgatctggcgaagaacattgacgagaaggtgaagaccctgtcaggt
gtggatgccattctggaggccacagagaacgacctgaagactgcacaggacctgctgtct
gcagcaatgaaggccaaggaggatgccgacaaggtgaagaccacagctgaagaggtacga
caagcgttggacgcggctgaagttgcccagcgcgatgcagaacaggccatccgggatgct
cagggtgacatcgacgacgcagaaggcaaactcacagggattgagtcagaaatcagcttg
gcagtgaacaagatcaacgatgcttcagcaaagatcgcccagatgaacaatgaattgacc
aacgagatcggccctaagtacaccaagaaccaggagaacaccaagtctgccaacgacatc
gccaatgctgccatgaagaaggcaaacgatgcccgtagtcaactggatgacctgagagcc
aaatacgaggaggctcagaggaaggtgaatgaccagtccacgccgggagacacgtccgca
caggccaccaagctgagacaggacgctgctgcgctcgctagcgaggtccagaaacaactc
acagacctgcaaaacctgaagctgtccttcaccagtcaaacagaaacactgaccacgaag
acaacggacctgacagaactgcagcgacgaatggagaccattctacaagaaatcaccacc
aaggccaccgaatacagcacctgcacgacatga
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