Branchiostoma floridae (Florida lancelet): 118424147
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Entry
118424147 CDS
T01074
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118424147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118424147
Enzymes [BR:
bfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118424147
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
118424147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
118424147
NCBI-ProteinID:
XP_035688561
UniProt:
A0A9J7N3V7
LinkDB
All DBs
Position
10:7671803..7699938
Genome browser
AA seq
1140 aa
AA seq
DB search
MAAPGTEEVPSLRNLTKARYGRPEKTQHRPLQDLVRPHVESFNWFLREGLSLAVQAIPKL
DFSLSNGRRISLSYVDASVGVPTVAQGNTFSRTLKVYPAECRERGTTYRAGLQARIAWSV
DGVNQGSVERMLGEIPLMVKSAHCNITKLTPAELIQRHEEAEEMGGYFINNGIEKVVRML
VMPRRNYPMAIVRPSWKGRGKLYTEYGVSMRCVTKDQTAATIVLHYLTNGTVTLCFVYKK
EQFFVPLIIILKALVETTDQHIYSELIKGKEDNSFFKGCVASMLRQAQNEGLMTQAGILK
YIGERFRVKLPVPDWYTDEEVGQFLLRQCVCIHLDSDWDKFNTLVLMTQKLFALAKGECS
VENQDSPMMQEMLLAGHLYLTILKDKLELWLTQLRYGIDKRSQDKGPSYKLDTVEMMSAM
RLCSDVTRGMEHFMATGSVVSKSNLGLMQTAGLTVVADKLNFMRYLSHFRCVHRGAFFAE
MRTTSVRKLLPEAWGFLCPVHTPDGAPCGLLNHMTASCEAVTLQPTTVHIPKLLCSLGMA
PLDSPAPAPPVDCYTVLLDGRVVGRVAANMAPDMARKLRMLKVTREGKIPVMTEIVLVPK
TGKASQFPGLFLFTTPARMMRPVRNLFTGTVEMIGSFEQVYMNICVRPEEAHPGVTTHQE
LRETSILSVAASFTPFSDFNQSPRNMYQCQMGKQTMGTPLHAFGHRTDNKLYRIQNPQSP
TVRPYAYDHYHMDDYPLGTNAVVAVISYTGYDMEDAMILNKSSLERGFGHGTIYKTEIIS
LRDLAQSARGPVTLVFGCAEGDKRVEGRLDDDGLPPIGSKLETGDPFYSYVDKQTGEARV
VLYKNQEKAIVDNIKVLGNDQGTSDMNKVAIVMRINRNPIIGDKFSSRHGQKGVCSQQWP
VEDMPFTEGGMTPDIIFNPHGFPSRMTIGMMIESMAGKSAAQHGLCHDATPFTFSEDNSA
IDYYGRMLIEAGYNYYGHERMYSGVTGVEFEADIFIGVVYYQRLRHMVADKFQVRTTGPI
DIVTHQPIKGRKRAGGIRFGEMERDSLLAHGATFLLQDRLFNCSDKSTCRVCTQCGSILS
PLLDKPPSELAAVSVQARRCWYCSVCQKSDFIQLIAVPYVFRYLVAELAAMNIKVTMETK
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccgggaacagaagaagtcccgagtctgagaaacctgaccaaagctcgctat
ggacgaccggaaaagacacaacacaggcctctccaagacctggtcagaccccatgttgaa
tccttcaactggtttttgcgagagggtctctcgcttgcagtgcaggccataccaaagctg
gatttttcattgtccaatggtaggagaatatcattatcctatgtggatgcttcagtcgga
gttccaacggttgcccagggtaatacgttctcgcgaacgttgaaggtgtaccctgcggaa
tgtcgtgagagagggacgacataccgcgctgggttgcaggcccgcatagcctggagcgtg
gatggggtcaaccaggggtcagtggagaggatgctgggagaaatccccctcatggtcaag
tctgcccactgtaatataactaaactgaccccagcagagctgatccaaaggcatgaggaa
gcagaggaaatgggaggctacttcatcaacaatggtattgagaaggttgtcagaatgctg
gtcatgccaagaagaaattatcccatggccatcgtacgtcccagttggaagggacgaggg
aagctgtacacagagtacggagtgtccatgagatgtgtcactaaagaccagacagctgca
accatagttctccactacctgaccaatgggactgtaaccttgtgtttcgtctacaagaag
gagcagttcttcgtgcctcttatcattattctcaaggccctggtagaaaccacagaccag
cacatctatagtgagctcattaaaggaaaagaggacaattctttctttaaaggatgtgta
gcaagtatgctgagacaggctcagaacgagggcctgatgacccaggctgggatactgaag
tacatcggagagcgcttcagggtgaagttacctgtacctgactggtacacagatgaagag
gtgggacaattcctactcaggcaatgtgtatgcatccacttggattcagactgggacaag
ttcaacacacttgtgttgatgacccagaagctgtttgcccttgccaagggtgagtgttcc
gtggagaaccaggattctcccatgatgcaagaaatgctgctggcgggtcacctctacctc
accatactgaaggacaagttggagctgtggttgactcagctgaggtatggaatcgacaaa
cggtcacaggacaaagggccatcctacaaactggacacagttgagatgatgagtgccatg
agactgtgcagtgatgtgaccagaggaatggaacacttcatggctacaggatcggtggtg
tccaagtctaacctgggtctcatgcagacggcaggtttaactgttgtggctgacaagttg
aactttatgcggtacctctcccatttccgctgtgtgcaccgtggagccttctttgcagag
atgaggacaacgtctgtcagaaaactgctgccagaggcctgggggttcttgtgtcctgtc
cacacccctgatggagctccctgtgggctgctgaatcacatgactgccagctgtgaggcc
gtcacgttgcagcccaccacagttcacattcccaaactcctgtgctccctgggcatggcg
cccctggacagccctgcaccagcgccccctgttgactgttacacggtactgctggatggc
agggtggtggggcgggtggcagccaacatggcacctgacatggccaggaagctgaggatg
ctcaaggtcaccagagagggaaagatcccagtgatgacagagatcgtgctggtgcctaag
acaggaaaagcgagccagttccccggcctgttcctgttcaccacacctgcccgcatgatg
aggcctgtcaggaacctcttcacaggcacagtggagatgattgggtcatttgaacaagtc
tatatgaacatctgtgtgagaccagaggaagcccacccaggtgtgaccacgcaccaggag
ttgagggagacctccatcctcagcgttgctgccagttttactcccttctctgatttcaac
cagagtcccaggaacatgtaccaatgtcagatgggtaagcagaccatgggcactcccctc
catgcttttggtcaccggacagacaacaagttgtaccgtatccagaacccccagtccccc
acggtcaggccgtacgcgtatgatcattaccacatggatgactaccccctggggacaaac
gcagtcgtcgctgtcatttcttataccgggtatgatatggaggatgccatgattcttaac
aagtcatccttggagagaggatttggtcatggcaccatctacaaaactgagatcatcagt
ctgagggatcttgcccagagtgccagaggtccagtaacacttgtgtttggatgtgcagaa
ggagacaaaagggtagagggtaggcttgatgatgacggactacctcccattgggtccaag
ctggagacaggtgacccattctatagctatgtggacaagcagacgggcgaggcacgagtg
gttctctacaagaaccaggagaaagccatcgtggacaacatcaaggtactggggaacgac
caggggacgtctgacatgaacaaggtcgccatagtcatgagaataaatagaaatcccatc
attggtgacaagttctctagtcgccatggacagaagggggtgtgcagccagcagtggccg
gtggaggacatgccgtttacagagggggggatgactccggatatcatcttcaaccctcat
gggtttccctccagaatgacaataggaatgatgatagagtcgatggcaggcaagtcggca
gcccagcacggtctgtgccatgatgccacacccttcaccttctctgaggacaactcagcc
atagactactacggccgcatgctaatagaagctggttataactactatggccatgagagg
atgtacagtggagtaacaggggtggagtttgaggcagatatcttcattggagtggtgtac
taccagagactcaggcatatggtggcagacaagttccaggtgagaacaacaggacccatc
gacatcgtgacccaccagccaatcaaaggcaggaagcgagcaggagggatccggtttgga
gagatggagcgtgactctctcctggctcacggagcaacgttcctcctgcaggacaggctc
tttaactgttccgacaagtcaacgtgccgagtgtgtacccagtgtggcagtatcctgtcc
cccctgctggataaaccccccagtgagctggctgcagtgtctgtacaggcacgcaggtgt
tggtactgcagtgtctgccagaaatctgactttatacagctgattgctgttccatacgtc
ttccgctacctggtggcagagctggccgccatgaacatcaaggttactatggaaaccaag
taa
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