Branchiostoma floridae (Florida lancelet): 118430551
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Entry
118430551 CDS
T01074
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfo03016
]
118430551
Enzymes [BR:
bfo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
118430551
Transfer RNA biogenesis [BR:
bfo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
118430551
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
TRAM_2
Motif
Other DBs
NCBI-GeneID:
118430551
NCBI-ProteinID:
XP_035697378
UniProt:
A0A9J7MA38
LinkDB
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Position
14:18102166..18130501
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AA seq
575 aa
AA seq
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MPTCGEFLEDIEDMVTSTDLTPEERFGSRKNVVPRVRKKNKVLETLDTQNSSQCDSVIPG
TQSIYVKTWGCSHNNSDGEYMAGQLAAYGYRITDTPSAADLWLLNSCTVKNPAEDHFRNT
ITRAQTEDKKVVVAGCVPQGQPRAKYLKGLSVIGVQQIDRVVEVVEETLKGHSVRLFGQK
KDHGKKLGGAKLDLPKIRKNPLIEIIAINTGCLNQCTYCKTKHARGELGSYPPEEIVSRA
RQSFEEGVVEIWLTSEDTGAYGKDIGVTLPELLWRLVEVIPEGCMLRVGMTNPPYILEHL
EEMAKILSHPRVYAFLHVPVQAASDSVLMDMRREYCLSDFKQVVDFLKERVPAVTIATDV
ICGFPTETAEDFEETLQLVEEYKFPSLFINQFFPRPGTPAAKMRRVPPQEVKRRTKAISE
LFQSYRPYDHKVGEIQNVLVTEESHDKKFYVAHNKYYDQVLVPKDEKLLGKMVTVEITST
GKHYLMGRLLSDEVTKVAIATPLPKGTVSGVQDNLQEATDSTTVTAQSPLSWCQHQLSRV
TPAGMPRWMQVAAFVLVLAVVLDFCRIVYRVGAKF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgcccacctgtggggaattccttgaagacatagaggacatggtgacctcaactgacctc
actcctgaggagcggtttgggtccaggaagaatgttgttcctcgtgtaaggaagaagaac
aaggtcctggagactttagacactcagaacagctcacagtgtgacagtgttatcccagga
acccagagcatctatgttaagacttggggctgctcacataacaactcagatggggagtac
atggcgggacagctggcagcttatgggtacagaatcacagacacgcccagtgctgcagac
ctgtggctgttaaacagctgtacagtaaagaacccggctgaagaccactttaggaacacc
atcacaagggcacagacggaggacaaaaaggttgtagtggctgggtgtgttcctcaggga
caaccaagagcaaaatatctgaaagggctcagtgtcataggagtccagcagatagacagg
gttgtggaagttgtagaggagactttaaaaggacacagtgtgaggctgtttggacagaag
aaggaccatgggaagaaactaggaggggccaaactggaccttcccaagattaggaaaaac
cctcttattgagatcatcgcaatcaacacaggctgcctgaaccagtgtacctactgtaag
accaagcatgccagaggagagctgggcagttatccacctgaagagatcgtctccagggcc
aggcagtcttttgaagagggagtagtggagatctggttgaccagtgaagacacgggagct
tatgggaaggacatcggagtgacactacctgaacttctgtggagacttgtggaggtcata
ccagaggggtgtatgttacgtgtgggcatgaccaacccaccctacatactggaacatcta
gaggaaatggctaagatcctgagccacccccgtgtgtatgccttcctgcatgtgccggtg
caggctgcctcagacagtgtgctgatggacatgaggagggagtactgtctgtctgacttc
aaacaagtcgtcgactttctcaaggaaagagttcctgctgttaccatagcaactgatgtc
atctgtgggtttccaacagaaacagctgaggattttgaggagaccctacagctggttgaa
gagtacaagttccccagtctgtttataaaccagttcttcccccgaccaggaaccccggct
gccaagatgcggagggttcctccacaggaggtcaaaagaagaacaaaagcaatatcagag
ctgtttcagagctacagaccatatgatcacaaggttggagaaatccagaatgtgttagtg
acagaagaatcacacgacaagaagttttatgtagcacacaacaagtactatgatcaggtt
ttggtacccaaagatgagaagttgctgggaaagatggtaacagtggagatcacgtcaacg
ggaaagcactacctcatgggaaggctgctgtcagatgaagtgaccaaggttgccatagca
accccgctgcccaaaggaaccgtgtcaggtgtacaagacaaccttcaggaagcaacagac
agcacaacagtgacagcacaatccccgctgtcctggtgtcagcaccagctgtccagggtg
actcccgccggcatgcctcgttggatgcaagtggctgcttttgttttagttctcgctgtt
gttttagatttttgtaggattgtttacagagtaggggctaaattctag
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