Bacteroides fragilis NCTC 9343: BF9343_0382
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Entry
BF9343_0382 CDS
T00239
Symbol
gadB
Name
(GenBank) putative glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
bfs
Bacteroides fragilis NCTC 9343
Pathway
bfs00250
Alanine, aspartate and glutamate metabolism
bfs00410
beta-Alanine metabolism
bfs00430
Taurine and hypotaurine metabolism
bfs00650
Butanoate metabolism
bfs01100
Metabolic pathways
bfs01110
Biosynthesis of secondary metabolites
bfs01120
Microbial metabolism in diverse environments
bfs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bfs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BF9343_0382 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BF9343_0382 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BF9343_0382 (gadB)
00430 Taurine and hypotaurine metabolism
BF9343_0382 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BF9343_0382 (gadB)
Enzymes [BR:
bfs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
BF9343_0382 (gadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
CAH06161
UniProt:
Q5LI66
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All DBs
Position
481258..482700
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AA seq
480 aa
AA seq
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MEDLNFRKGDAKTEAFGSNRMLQPSPVEKIPDGPTTPEIAYQMVKDETFAQTQPRLNLAT
FVTTYMDDYATKLMNEAININYIDETEYPRIAVMNGKCINIVANLWNSPEKDTWKTGALA
IGSSEACMLGGVAAWLRWRKKRQAQGKPFDKPNFVISTGFQVVWEKFAQLWQIEMRQVPL
TLDKTTLDPEEALKMCDENTICVVPIQGVTWTGLNDDVEALDKALDAYNAKTGYDIPIHV
DAASGGFILPFLYPDTKWDFRLKWVLSISVSGHKFGLVYPGLGWVVWKGKEYLPEEMAFS
VNYLGANITQVGLNFSRPAAQILGQYYQFIRLGFQGYKEVQYNSLQIAKYIHSQIAKMTP
FVNYSEDVVNPLFIWYMKPEYAKNAKWTLYDLQDKLAQHGWMVPAYTLPAKLQDYVVMRV
VVRQGFSRDMADMLLGDIKNAIAELEKLEYPTSTRIAQEKNLPVEAKVFNHTGKPQAAKK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttaaatttcagaaaaggtgatgctaaaacagaagcatttggttcaaacaga
atgttacaaccctctccggtagagaaaatacctgatggtcctactactccggaaatcgcc
tatcagatggtgaaggacgaaacttttgctcaaactcagccccgtctgaatcttgctaca
ttcgtgactacttatatggatgattatgcaacgaagctgatgaacgaagctatcaatatc
aactacattgatgagacagaatatcctcgcattgctgtgatgaacggtaaatgtatcaat
atcgttgctaatttgtggaactctccggaaaaagatacctggaaaaccggtgcattggct
atcggttcttcagaagcttgtatgttgggtggtgtagctgcctggttgcgttggcgcaaa
aaacgtcaggcccagggtaaaccatttgataaacctaactttgtcatttcaaccggtttc
caggttgtttgggaaaaatttgctcagttgtggcagattgagatgcgtcaggtgcctttg
acgctggacaagaccacacttgacccggaagaagccctgaagatgtgtgatgaaaataca
atctgtgtagttccaatccaaggggttacatggaccggtctgaacgatgatgttgaagcc
cttgacaaagccctcgatgcgtataacgctaaaaccggttatgatattcctattcacgta
gacgctgccagcggtggtttcatcctgccgttcctgtatcctgataccaaatgggacttc
cgtctgaaatgggttctttccatcagtgtatccggccataagttcggtctcgtatatccg
ggtttgggttgggttgtctggaaaggcaaagaatatctgcccgaagaaatggctttcagc
gtaaactacttaggagctaacattactcaggtaggtttgaacttctctcgtcctgcagct
cagattttgggacaatattatcaatttattcgtttaggattccagggatacaaggaagta
caatacaactctttgcagattgccaaatacatccacagccagattgctaagatgactccg
ttcgtcaactactcggaagatgtagtaaacccgttgttcatttggtacatgaagccggaa
tatgcaaagaacgccaaatggactctttacgatttgcaggataagctggctcagcatggc
tggatggttccggcatatacattgcctgccaagctgcaagattatgtggttatgcgtgtc
gttgtccgtcagggattcagtcgtgatatggccgacatgttgctgggcgacattaagaat
gctattgccgaactggaaaaactggaatacccgacatccactcgtattgcccaggagaag
aatctgccggtagaagccaaagtatttaaccataccggtaaaccacaagctgccaagaaa
taa
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