Bufo gargarizans (Asiatic toad): 122939099
Help
Entry
122939099 CDS
T07965
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122939099 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgar03021
]
122939099 (POLR1A)
Enzymes [BR:
bgar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122939099 (POLR1A)
Transcription machinery [BR:
bgar03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
122939099 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
Motif
Other DBs
NCBI-GeneID:
122939099
NCBI-ProteinID:
XP_044151016
EnsemblRapid:
ENSBGGG00000001302
LinkDB
All DBs
Position
1:complement(40951131..41043410)
Genome browser
AA seq
1695 aa
AA seq
DB search
MLFSRDVPWRRLQRISFAVYSSDEIRMLSVKAITNPQYLDPAGNPMINGLYDLALGPPDN
KEFCATCSQDFISCPGHLGHIELPLTVYNPLLFDKLYLLVRGSCFRCHLLTCPRSTIHLL
LNQLKLLDRGALQEMYEVEAVLSRFLEGNTGVSGNEIQEELETYTKKVLKAYPKKRDVSS
VKNICLARNKLLSDFWKTEMASKKCPHCKAPRSIVRKEHNSKLTIMMSSKKTDEEVSEIK
DTAELTQRGYLTPSTTKEHIEALWEKEGFFLQCLFSGMAIGDNFSLDMFFLDLVVVPPSR
FRPINRQADQMYTNGQTVNLQAVLKDVTTIQKLLAVMAEEQIKTPNGTETEVIEDSTNPV
QSVDRSFLMALQGRSLTDKLYNSWVRLQGHVNIVFDSEMDKLMTDKYPGIRQLLEKKDGL
FRKHMMGKRVDYAARSVICPDMYISTNEIGIPMVFATKLTYPQPVTTWNVQELRQAVING
PSVHPGASMVVCEDGSRTILTSSLSQREAIAKQLLTPSTGSQKLTSKIVYRHVKNGDVLL
LNRQPTLHRPSIQAHKARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAY
TLACTDEQYLVPKDGTPLAGLIQDHMVSGASMTIRGCFFTRDQYMELVYRGLTDKKGRVK
TLPPAIMKPCRLWTGKQVVSTLLINVIPDHYIPLNLTGKAKINGKAWVKETPRPIPGFDS
DSMCESKVIIQDGELLCGVLDKAHYGSSSFGLVHCCYELYGGETSGKLLTCLARLFTAYL
QLYRGFTMGVEDILVRPYADAARQKIVESSTLCGGKAIRAAFNLSQLASDEEAKEKWEDA
HLSKDQRDFNMVDLKFKEEVNLVSNEINQVCMPLGLHRRFPENNLQLMVQSGAKGSTVNT
MQISCLLGQIELEGRRPPLMPSGKSLPCFQPYDFTPRSGGFVTGRFLTGIKPPEFYYHCM
AGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDVPKT
QFLQPNQFPFIAENYEVIRQLKRLDEVLCKMDSEQANRYCQAIRKWRDKLAGSSQRLGAF
LLYSQKKLAAFKEHIPEGLSEYGREEAVTQLIDSWRALDPKLQRKYIKRSPRLPDPCLSV
LRPDLYFGSVSESFQNKVDQYMEQRETRGDSSYGKSKVPSDSLRTLLQLKWQRALCDPGD
AVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILLIASSNIKTPMMSVPVL
PTKKATRRVQKLKKQLTRVCLGEVLHKLDAEETFRIEEKCQKFHVYKIKFHFLPYEYYRR
EKCLRPEDVLRIMETRFFRIMLEAIKRRSAKLASYRDVTSRKASQKDVEDEGGEAAATQE
NQEAEAEEQDIVDADAEEGDADATDAMRKKKQEEEVDYESGEEEGAENEEEQDEENASTE
EKVESEEDEEDRSPSPSSKERETETNITENVLSEGRVNAVLDLNPSIEDYSYDAERSLWC
QITLKLPLMKVHFDISSLISSLAQNVVIHETRGISRCLLNDTTNHRGEKELILNTEGINL
QEMFKYSDILNLRRLYTNDIHAMANTYGIEAALRVVQKEIKDVFAVYGIAVDPRHLSLVA
DYMCFEGTYRPLNRYGIQSSSSPFQQMTFETSYKFLKDATMSGAKDHLQSPSACLVVGKV
VKGGTGLFDLKQPMK
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctccagggatgtgccatggcggcgcctgcagcgcatctcattcgccgtttac
tcttcagatgagatcaggatgctgagtgtgaaagccatcaccaatccccagtacctggac
ccggcgggcaatcctatgataaacggcctgtatgacctggccctgggccccccagacaac
aaagaattttgcgccacctgctctcaggacttcattagctgccccggacacctgggccac
atcgagctgcctctcactgtatataatcctctgctctttgataaactgtacctccttgtg
cgaggctcctgcttccgctgtcacctgctgacatgtcctcgctccaccattcatctgctg
cttaaccagctgaagttactggaccgaggagccctccaggagatgtacgaagtagaggcc
gtcctcagccggttcttagaagggaacactggagtcagcggtaacgagattcaggaggaa
ttggaaacctacaccaaaaaagtgcttaaagcctacccgaagaagcgggacgtatccagt
gtgaagaatatctgtttggccaggaacaagctcttaagtgacttctggaaaacggaaatg
gcttccaagaaatgtcctcattgcaaggcaccgcgctccatagtacgaaaagagcacaac
agcaagctgaccatcatgatgagctccaagaaaacggacgaggaagtctcagaaattaag
gacaccgccgagctcacacagcgaggctacctgacccctagcactactaaggagcacata
gaagcactttgggaaaaagaaggtttcttcctccagtgcctgttttctggcatggcgatc
ggcgacaacttttccctggacatgttcttccttgatcttgtagtggttcctccatctcgt
ttccgcccgatcaatcgccaggcagatcagatgtacaccaacgggcagacggttaacctc
caggccgtcctcaaagatgtgaccaccatacagaagttgctggcggtgatggctgaggag
caaataaagactccaaatggtacagagacagaagtcatcgaggacagcacgaaccctgtg
caaagcgttgatcgatccttcttgatggcactgcagggccgaagtctcacagataagctt
tataactcttgggttcgcttacaagggcacgtaaacatcgtgtttgatagcgagatggac
aaactgatgacggacaagtatcctggaatccgtcagctactggagaagaaggatggtcta
tttcggaaacacatgatgggaaaacgtgtggactacgcagctcggtctgttatttgccct
gatatgtacatcagtactaatgagattggcatcccaatggtatttgccaccaagttaacc
tatccccagcctgtcacaacgtggaacgtgcaggagttgaggcaggcggtcatcaacgga
cccagtgtgcatcccggggcctccatggtggtttgtgaagatgggtctcgcacaatattg
acctctagtctttcacagcgggaagccattgccaagcagctgctcactccatccaccggt
tcacagaagttgacttcgaaaatcgtttatcgtcacgtcaagaatggcgatgtcctgcta
ctcaaccggcagcccacactgcacagaccgtccatccaagctcacaaggctcgaatcctc
ccaggagagaaagtgctgcgacttcactacgccaactgcaaggcctataatgccgacttt
gacggagacgaaatgaacgctcattttcctcaaagtgaacttggtcgagctgaggcctac
accttagcgtgtaccgacgagcagtatttagtgcccaaggatggcactcccttagccgga
ctcatccaagatcacatggtgtctggagccagcatgaccatccgtggttgcttctttacc
agagatcagtacatggagctggtatacagaggtctgactgataagaagggccgggtgaaa
acccttccacctgcaattatgaaaccctgcagactatggactggaaaacaggtggtctct
acgttactgatcaacgtcatcccagatcactatatacctctcaacctgacgggaaaagca
aagatcaatgggaaagcgtgggtgaaggagaccccccggcccatccctggttttgactcg
gattctatgtgcgagtcgaaggtcatcatacaagatggagagctgctctgcggggtgctg
gataaagcgcattatggcagctcctccttcggtcttgtccactgctgctatgagctctat
ggtggcgagaccagcgggaaattgctgacctgcctagcccgcctcttcacagcctacctg
cagctctaccggggcttcaccatgggggtggaggacattctggttcgaccttacgctgat
gcggccagacagaagatcgtggaaagctccacactttgtggtgggaaggcgatccgagca
gctttcaacctctctcagctggcctccgatgaggaggctaaggagaaatgggaggacgcc
catctaagtaaagaccagagggacttcaacatggttgacttgaagttcaaggaggaagtg
aatctagtgagcaatgagataaaccaggtgtgtatgccgcttggtctccacagacggttc
ccagagaataatttacagctgatggtccagtctggagctaaaggatccactgtcaatacc
atgcagatctcttgccttttgggtcaaattgaattggaaggtcggcggccaccactgatg
ccttctgggaaatccctaccttgttttcaaccctatgattttacaccacgatccggcggc
tttgtgactggacgcttcctcaccggcatcaaacctccggagttctactatcactgtatg
gccgggagagaaggtctggtggacactgctgtgaagacaagtcgttccggttatctccag
aggtgcatcatcaagcatctcgaggggctggtggttcagtatgacctcacagtgcgtgat
agcgacggcagcgtggtgcagttcctgtacggcgaagacggactggacgtgcccaagacg
cagtttctgcagccgaatcagtttccgtttattgctgagaactacgaggtgatcagacag
ttgaaacgcttggatgaagtcttgtgtaaaatggattccgagcaggctaaccgctactgc
caggctatccggaagtggagagacaaacttgctggttcttcacaaaggcttggggcattc
ctcttgtactcccaaaagaagctggcggcttttaaagagcacatacctgagggactgagt
gaatatggacgggaagaggccgtcactcagctgattgatagttggcgtgccctggaccca
aagctgcagaggaagtacataaaacggtcccctcgcctgcctgacccttgcctctcagtc
ctccgtccagatctttattttggatccgtgtctgaaagttttcaaaacaaagtcgatcag
tacatggagcagcgggaaacgcggggcgactccagctacggcaagtcaaaggtgccatct
gacagtttaaggactttgctgcagctgaaatggcagagagccctgtgtgaccccggggat
gcggtgggccttctcgcagctcaaagcatcggagaaccctccacccagatgacactgaac
accttccactttgcaggcagaggagagatgaacgtcactctaggtatccccagactcaga
gaaattttgttgattgcaagctccaatattaaaactcccatgatgagcgtgcccgtcctg
cccactaagaaagctacgagaagagtacaaaaactgaagaagcaactgacccgtgtgtgt
ctgggtgaggtattgcacaagctggatgcagaagaaaccttccgcattgaagagaaatgc
cagaaatttcacgtctacaaaataaaattccacttcttgccatatgaatattatcggcgg
gagaagtgcttgagacctgaggatgtgctacgcattatggagaccaggttcttccgaatt
atgttggaagccatcaaaaggagaagtgcaaaacttgcctcttacagggatgtaaccagc
agaaaggcgtctcaaaaagatgtggaggatgaaggcggggaagcggcagcaacgcaggag
aaccaagaagccgaggctgaagaacaagacattgtggacgctgatgctgaggagggtgat
gccgatgctacagatgcaatgcggaaaaaaaagcaagaggaggaggtcgattatgaaagt
ggagaggaagagggagcggagaatgaagaggagcaggacgaggagaatgcttccactgag
gaaaaggttgagagtgaggaggatgaagaagatcgcagtccctcaccttcctccaaagag
agagaaaccgaaacaaacataacggagaacgtgttgtcagagggccgggtgaacgctgtc
ctggatctcaatcccagcatcgaagactactcctatgacgcagaaagaagcttgtggtgt
cagatcacgctgaagctgccgctcatgaaggtccacttcgatatctcctctctcatctcg
tccctggcacaaaatgtcgtgatccacgagaccagaggaataagccgctgtctcctcaac
gataccactaaccatagaggagagaaggagctgatcctgaacacagagggcatcaatctc
caggagatgttcaagtattcagatatcctgaacctgagacgcctgtataccaatgatatc
catgcgatggccaacacgtacggcatagaggctgcgctgagggtggtgcagaaagaaatt
aaagatgtgtttgctgtatacggtattgcggtagacccccgacacctgtccctggtagca
gactacatgtgctttgagggaacttatcggcctctcaaccgctacgggattcagtccagc
tcttcccctttccaacaaatgacctttgagaccagctacaagttcttgaaggatgctaca
atgagtggtgccaaggaccatcttcagtctccgtccgcatgtctggtggttgggaaagtt
gtaaaaggaggcactggattgtttgacctcaagcagccaatgaaataa
DBGET
integrated database retrieval system
