Paraburkholderia atlantica CCGE1002: BC1002_3089
Help
Entry
BC1002_3089 CDS
T01217
Name
(GenBank) L-serine dehydratase 1
KO
K01752
L-serine dehydratase [EC:
4.3.1.17
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge00260
Glycine, serine and threonine metabolism
bge00270
Cysteine and methionine metabolism
bge01100
Metabolic pathways
bge01110
Biosynthesis of secondary metabolites
bge01200
Carbon metabolism
bge01230
Biosynthesis of amino acids
Module
bge_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BC1002_3089
00270 Cysteine and methionine metabolism
BC1002_3089
Enzymes [BR:
bge01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.17 L-serine ammonia-lyase
BC1002_3089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDH_alpha
SDH_beta
PT-VENN
Motif
Other DBs
NCBI-ProteinID:
ADG17134
UniProt:
D5W6Y8
LinkDB
All DBs
Position
1:3409945..3411333
Genome browser
AA seq
462 aa
AA seq
DB search
MAVSVFDLFKIGIGPSSSHTVGPMRAALMFVQGLERDGLLDSTAAVKAELYGSLGATGKG
HGTDRGVMLGLMGDAPDTVDPDTIAQRLEAVRTSRKLALLGTHEVPFVQKEQIAFYRQAL
PEHPNGLKLFAFDAQGATLRESTYLSVGGGFVVTAGAPNTKVLSAVDQLPHSFRTGNELL
ALCASSGKSIAQLMWENERVWNSEEETRAGLLKIWDVMQSCVARGCGINNPDADGHLPGP
FQVKRRAPQLYRALTGNPERALQDPLSMVDWINLYAIAVNEENAAGGRVVTAPTNGAAGI
IPAVLHYYTRFMPGANEQGVIDFLMTAAAIGTLYKLNASISGAEVGCQGEVGVACSMAAG
ALAAVMGGTPKQVENAAEIGMEHNLGLTCDPVGGMVQIPCIERNAMASVKAVNAARMALR
GDGSHYVSLDSVIKTMRETGADMKTKYKETSRGGLAVNIVEC
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagcgtcttcgatctcttcaaaatcggcattggtccgtcgagctcgcatacg
gtcgggccgatgcgcgcggcgctgatgttcgtccagggactcgagcgcgacgggctgctc
gattccaccgcagcggtgaaagcggagctgtacggctcgctcggcgcgaccggcaagggg
cacggcaccgatcgcggggtgatgctaggcctaatgggcgatgcgcccgacaccgtcgat
cccgacacgatcgcgcaacggctcgaagcggtgcgcacgtcgcgcaaactcgcgctgctc
ggcacgcacgaggtacctttcgtgcagaaggagcagatcgcgttttatcgccaggcgctg
cccgagcatccaaacggcctgaagctgttcgcgttcgatgcgcaaggcgcgacgctgcgc
gagtcgacctatctgtcggtcggcggcggcttcgtcgtgacggccggcgcgccgaacacg
aaggtgttgagcgctgtcgaccagcttccgcactcgtttcgtaccggcaacgaattgctc
gcgctgtgcgcgtcgagcggcaagagcatcgcgcagctgatgtgggaaaacgaacgagtc
tggaacagcgaggaagaaacgcgcgcgggtctgctgaagatctgggacgtgatgcaatca
tgcgtcgcgcgcgggtgcggcatcaacaatcccgacgccgatggtcacttgcccggcccc
ttccaggtgaagcggcgcgcgccacaactgtatcgcgcgttgacgggcaatcctgagcgc
gcgttgcaggacccgctgtcgatggtcgactggatcaacctgtacgcgatcgccgtcaac
gaagagaacgccgcgggcgggcgcgtcgtcaccgcgccgaccaacggcgcggccggcatc
attccggcggtgctgcattactacacgcgcttcatgccgggcgcgaacgagcagggcgtg
atcgacttcctgatgacggccgccgcgatcggcaccctgtacaagctgaacgcgtcgatc
tccggcgcggaggtgggctgtcagggcgaagtcggcgtcgcctgctcgatggccgcgggc
gcgctggccgccgtgatgggtggcacgccgaagcaggtcgagaacgcggcggaaatcggc
atggagcacaacctcgggctcacctgcgatccggttggcggcatggtgcagattccgtgc
atcgagcgcaatgcgatggcatcggtgaaggcagtcaatgccgcgcgcatggcgttgcgc
ggcgacggcagccactatgtgtcgctcgattcggtgatcaagacgatgcgtgaaaccggc
gcggacatgaagacaaagtacaaggaaacgtcgcgcggcggactcgcggtgaatatcgtc
gaatgttga
DBGET
integrated database retrieval system