Paraburkholderia atlantica CCGE1002: BC1002_3843
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Entry
BC1002_3843 CDS
T01217
Name
(GenBank) sarcosine oxidase, alpha subunit family
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge00260
Glycine, serine and threonine metabolism
bge01100
Metabolic pathways
Module
bge_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BC1002_3843
Enzymes [BR:
bge01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
BC1002_3843
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
BC1002_3843
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
Pyr_redox_3
DAO
Pyr_redox
FAD_binding_2
HI0933_like
GIDA
FAD_binding_3
AlaDh_PNT_C
NAD_binding_7
Thi4
XdhC_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ADG17855
UniProt:
D5WHB0
LinkDB
All DBs
Position
2:710658..713660
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AA seq
1000 aa
AA seq
DB search
MSQKDRLPTGGRINRAIALSFTFNGVEYQGYQGDTLASALLANGMHFVARSWKYHRPRGI
VTAGVEEPNAVVQLETGAYTVPNARATEVELYQGLVASSVNAKPSIEKDRMAINQKIARF
IPAGFYYKTFMWPRKLWPKYEEAIRDAAGLGTAPKQRDADRYDKCFAHCDVLVVGGGPTG
LAAAHAAALSGARVTLVDDQPELGGSLLSCAAEIDGKPALQWVQKIEDELRQMPDVKILS
RSTAFGYQDHNLVTVTQRLTDHLPVSQRKGTRELLWKIRAKRVILATGAHERPIVFGNND
LPGVMLASAVSTYLHRYAVLPGRNAVVFTNNDDGYQCALDLKAAGAQVSIIDPRAGESKG
TLPALARRHGIKVLNGTVVTAAHGKLRVASVSLASYAKGQITAQQGQLPCDLLAMSGGWS
PVLHLFAQSGGKAHWHDDKACFVPGKAVQPETSVGACAGDFTLGQGIRFAVDAGVEAARA
AGHIVARPKPVQVAELSEAKLEPLWLVGGRELATRGPKQFVDFQNDVSAADIFLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKTIPETGTTTFRPNYTPVTFGTFAG
RELGELLDPVRKTAIHEWHVEHGAAFEDVGNWKRPWFYPKKGEDMHAAVARESLAVRTSV
GILDASTLGKIDIQGPDSAKLLNWVYTNPWTKLEVGKCRYGLMLDENGMIFDDGVTVRLA
EQHYMMTTTTGGAARVLTWLERWLQTEWPDLRVRLASVTDHWATFAVVGPQSRKVLRKVC
DDIDFANAAFPFMTYREGTVAGAAARVMRISFSGELAYEVNVPANVGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPHDLGMGGLVAKSKDFLGKRSLSRSDTA
KAGRKQLVGLLSEDASFVIPEGSQIVAGPFQGETAPMLGHVTSSYYSPILRRSIAMAVVK
DGLDKIGTTVTIPLSSGKQIAAKIASPVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgactcccgaccggcggccgcatcaatcgtgcgatcgcgctgagc
ttcacgttcaacggcgtcgaataccagggctatcagggcgatacgcttgcgtccgcactg
ctcgccaacggcatgcatttcgtcgcgcgcagctggaaatatcatcggccgcgcggcatc
gtgaccgcgggcgtcgaggagccgaacgcggtcgtgcagctggagaccggcgcctacacg
gtgccgaacgcgcgggccaccgaggtcgagctgtaccaggggctcgtcgcgagcagcgtg
aacgcgaagccgagcatcgagaaggaccgcatggcgatcaaccagaagatcgcgcgcttc
attccggcgggcttctactacaagaccttcatgtggccgcgcaagctctggccgaagtac
gaggaagcgattcgcgacgcggccggcctcggcaccgcaccgaaacagcgcgacgcggac
cgctacgacaaatgcttcgcgcattgcgacgtgctggtggtcggcggcggcccgaccggg
cttgcggccgcgcacgcggcggcgttgtcgggcgcgcgcgtgacgctggtcgacgatcag
cccgaactcggcggctcgctgctgtcgtgtgccgcggagatcgacggcaagccggcgctg
caatgggttcagaagatcgaagacgaattgcggcagatgcccgacgtgaagatcctgagc
cgcagcaccgcattcggctaccaggaccacaatctcgtcacggtcacgcagcgactgacc
gatcatctgcccgtgtcgcagcgcaagggcacacgcgaactgctgtggaagatccgcgcg
aaacgcgtgattctggcgaccggcgcgcatgaacggccgatcgtgttcggcaacaacgat
ctgcctggcgtgatgctggcttcggcggtgtcgacctatctgcatcgctatgcggtgctg
ccgggtcgcaacgcggtcgtgttcaccaataacgacgacggctatcaatgtgcgctcgac
ctgaaagcggccggtgcgcaggtaagcatcatcgatccgcgcgcgggtgaatcgaagggc
acgctgcccgcgctcgcgcgccgccacggcatcaaggtgctgaacggcacggtcgtcacg
gcggctcacggcaagctgcgcgtcgcatcggtgtcgctcgcgtcgtatgcgaaaggtcag
atcaccgctcaacagggccaactgccgtgcgatctgctcgcgatgtcgggcggctggagc
ccggtgctgcatctattcgcacagtcgggcggcaaggcccactggcatgacgacaaggcc
tgcttcgtgccgggcaaggcggtccagccggagaccagcgtcggcgcctgcgcgggcgac
ttcacgctcggccagggcatccgtttcgcggtcgatgccggcgtcgaagcggcgcgcgcg
gccgggcacatcgtcgcgcggccgaagccggtgcaggtcgccgagctgagcgaagcgaag
ctggaaccgctgtggcttgtcggcggacgcgaactggccacacgcgggcccaagcagttc
gtcgatttccagaacgacgtctcggccgccgatatcttcctcgccgcgcgcgagggcttc
gaatcggtcgaacacgtgaagcgctacaccgcgatgggcttcggcaccgaccagggcaag
ctcggcaacatcaacggcatggcgattctcgcgcaggcactcggcaagaccattcccgag
accggcacgacgacgttccggccgaactacacgccggtcacgttcggtacgttcgccggc
cgcgagctgggcgaattgctcgacccggtgcgcaagaccgcgatccatgaatggcacgtc
gaacatggcgcggcgttcgaggacgtcggcaactggaagcgtccgtggttctacccgaag
aagggcgaagacatgcacgcggcggtagcgcgggagtcgctcgcggtgcgcaccagcgtc
ggcattctcgatgcgtcgacgctcggcaagatcgacattcagggcccggactccgcgaag
ctgctgaactgggtgtacacgaacccgtggaccaagctcgaagtcggcaagtgccgctac
ggcctgatgctcgacgaaaacggcatgatcttcgacgacggcgtgaccgtgcgcctcgcc
gagcagcactacatgatgacgaccaccaccggcggcgcggcgcgcgtgctcacgtggctc
gaacgctggctgcaaaccgaatggcccgacctgcgcgtgcggctcgcgtcggtcaccgat
cactgggcgacgttcgcggtggtcggaccgcagagccgcaaggtgctgcgaaaagtctgc
gacgatatcgacttcgcgaacgcggcgttcccgttcatgacgtatcgcgaaggcaccgtc
gcgggtgcggcggcgcgcgtgatgcgcatcagcttctccggcgaactcgcttatgaagtc
aacgtgccggccaacgtcggacgcgcggtgtgggaagcgttgatggccgcgggcgcggaa
ttcgacatcacgccgtacggcaccgaaacgatgcacgtgctgcgcgcggagaagggctac
atcatcgtcggccaggataccgacggttcgatgacgccgcacgacctcggcatgggcggg
ctcgtcgcgaagtcgaaggactttcttggcaagcgctcgctctcccgctcggacaccgcg
aaggcggggcgcaagcaactggtcgggctgttatcggaagatgcatcgttcgtgataccc
gaaggctcgcagatcgtcgccgggccgttccagggcgaaaccgcgccgatgctcgggcac
gtcacgtcgagctattacagcccgattttgcggcgctcgatcgcgatggcggtcgtcaag
gatggtctcgacaagatcggcacaaccgtcacgattccgctttcaagcggcaaacagatc
gcggcgaaaatcgcgagtccggtgttctacgacagcgaaggagcacgtcaacatgtggaa
tga
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