Blastomyces gilchristii: BDBG_03013
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Entry
BDBG_03013 CDS
T06540
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BDBG_03013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgh03021
]
BDBG_03013
Enzymes [BR:
bgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BDBG_03013
Transcription machinery [BR:
bgh03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
BDBG_03013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
8506130
NCBI-ProteinID:
XP_031577470
LinkDB
All DBs
Position
Unknown
AA seq
1698 aa
AA seq
DB search
MASFTRPISSSIGEVDFGVLSNDEIKSISVKRIYNTPTLDTLNNPVPGGLYDPALGAWGD
HVCTTCRLNSWSCNGHAGHIELPVHVYNVTFFDQLFRLLRAQCAYCHRFRMSRADIKSYT
CKLRLLQYGLVEEAAAIDNMEARRGTNNDAGSESGESEDEDEEDFVRRRDAYVKRCIQQV
LARSKHQEFLHGAKNSAAVEQRRNIVRGFLKDITAVKKCASCSGISPPFRRDKYSKIFKK
PLPQKAKIAMAEAGFHVPNPLLLIKEAIDLSKKHGHPSQGSNMNGYPDDDNASVSTDSHG
AEQQITMGNAVLAQVEVKGSRNKPSEQDAQQFMPSPEVYAALRLLFEKEQEVLDLVYDSR
PRSKHRPRVTPDMFFIKNILVPPNKYRPIAANGSNDIIEAQQNTSFTRIIKLCDQINQIS
RERQGDSTESVTRLRDYRDLLQTIVQLQDAVNSLIDRDRNPSQGISGMQNEDGIKQRLEK
KDGLFRKNMMGKRVNFAARSVISPDPNIETNEIGVPLVFAKKLTYPEPVTNHNYWELKQA
VINGPDIYPGAAAVENEVGQVVSLKFKSHDERMAIANMLLSPSNFKMKRSRNKKVYRHLT
TGDVVLMNRQPTLHKPSIMGHRARVLTGERTIRMHYANCNTYNADFDGDEMNLHFPQNEL
ARAEAMQLADTDHQYLSATAGKPLRGLIQDHISMGTWFTSRDTFFDKDDYYQLLYSCLRP
ENSHTVTDKILLMEPTILRPQKLWTGKQVISTIMMNITPERLHGLNLTGKSSTRGDRWGE
GSEEGQVIFRDGELLCGILDKAQLGPSPRGLVHSVHEIYGHVVAGKLLGVLGRLLTKFLH
MRAFTCGMDDLRLTKKGNEARKRKLEEAEDIGRKIALKYVTLDQTKVEDEEAELKRRLED
ALRDDAKQAGLDAVFNSQTGKLSSEITSACLPTGLEKPFPWNQMQAMTSSGAKGSVVNAN
LISCNLGQQVLEGRRVPVMISGKTLPSFRPFETSLMAGGFISGRFLTGIKPQEYYFHAMA
GREGLIDTAVKTSRSGYLQRCLIKGMEGLKAEYDNTVRETADGSVMQFLYGEDGLEIIKQ
NHLQDFTFLAQNFWSVVEELNGSDELNKVKDDKAGEWNQNAIKKLRKTGKLDCVDPALSL
FPPGSCYGSTSESFAMALRKYQKENPDKLLKEKGKTESRISKKDFTRVMNMKYMRSVVEP
GESVGIVAGQSIGEPSTQMTLNTFHLAGHSAKNVTLGIPRLREIVMTASDKILTPTMTGV
LNKQLTEKDGRVFAKAISKLTLAEVVDTLRVHERISSGSSRGKAKIYDIEIDFFPPDEYT
EEYAIQIEDILKTLQHKFVPRLVKLTRAELKKRIDEKSLSTFSSAQPDIGTSAGVIEEST
RRFGREARDGDDDNDDDEEEDQDDAKRAMANMNRSNQVSYEDPDEGEEAIIREQDSEEPD
SDDNEEAEGNRHGDGTATEDVDMPDADADSDSEKIQKSKESEDTIIGKHAEITKFKFNLK
KGKSCHIQLRYDISTPKLLLLPLVEDAVRTSVIQFVKGLGTCTYIEADDKEPAHIVTDGV
NLLAMRDYQDYVYPHSLYTNSIADMLLMYGVEAARASIIREMAAVFDSHSISVDNRHLNL
IGDVMTHAGGFRAFNRMGLVKDSTSPFMKMSFETTVGFLRDAVLERDWDNLDSPSSRIVM
GRVGTIGTGAFDVLAPVG
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggctagcttcacacggccgatttcatcctcgattggggaggtcgattttggagtgctt
tccaatgacgagatcaaatcgatctccgtcaagcgtatttacaacacccctacgcttgat
acattgaataaccctgtaccaggaggattgtacgatcctgctctcggagcatggggtgat
catgtatgtactacatgccgtctgaattcctggtcctgcaatggccatgccggacatata
gagctgcctgtccatgtgtacaatgtcactttcttcgaccagctatttcgcctcctaaga
gctcaatgtgcctattgccatcgctttagaatgtctcgggccgatatcaagtcctacacg
tgcaaattgagactgttacagtacggtttggttgaggaagctgcggcgattgataatatg
gaagctcgaagaggcacaaataatgatgctggttcagaatcaggagaaagtgaggatgaa
gacgaggaagactttgtcaggcgccgggatgcgtacgtcaaaaggtgtattcaacaagta
ctggcgagaagtaagcatcaggaatttttacatggcgcaaagaattccgcagctgtagaa
caacggaggaatattgtacgaggatttcttaaggatatcacagctgttaaaaaatgtgcc
tcttgtagtggtatttcccctccgttccgtagagacaaatactcgaaaatattcaagaag
ccgttaccgcaaaaggctaagatcgcaatggcggaggctggatttcatgtccctaaccca
ttgttgttgataaaagaagcgatcgacctgtcgaagaaacatggccatccgtcgcagggt
tctaatatgaatggctacccagatgacgacaatgctagtgtttcgacggattctcatggt
gcagaacagcagatcaccatgggaaatgcagtattggcacaagtcgaggtaaagggatct
cggaacaaacctagtgaacaggatgcgcagcaattcatgccgtcaccagaagtttacgca
gcactgcgactccttttcgaaaaggaacaagaagttttagatctagtatacgactcacgg
ccgagatcaaaacaccgcccacgcgtcactccagacatgttttttatcaagaatattctc
gtaccgccaaacaaatatcgcccgatagctgccaatggctcgaatgatatcatagaagcg
caacaaaacacctcgttcaccagaatcataaaactttgcgaccaaataaaccaaattagt
agagaaaggcaaggtgatagcaccgagtctgttactaggttacgagattaccgggacctc
cttcagacaattgtacagctacaagatgcggtcaatagccttatcgatcgcgatcgtaac
cccagccagggaatttcaggaatgcaaaatgaagatggtatcaaacagaggctggaaaag
aaggatggtctatttcggaaaaatatgatgggaaaacgggtcaactttgccgcaagaagc
gtcatatcaccggaccctaatattgaaaccaatgaaattggagttcctctcgttttcgcg
aagaagctcacctacccggagccggtcaccaatcataactactgggaacttaaacaagct
gtgataaatgggcctgatatttatcctggtgccgctgccgttgagaacgaggttggtcaa
gtggtgagccttaaattcaaaagccacgacgaacgaatggccatcgccaatatgctcctt
tccccgtcaaacttcaagatgaaacgatcgagaaacaagaaagtttaccggcatctaacc
accggcgatgtcgtgctgatgaatcgacaacccacgctccacaagccgtctataatgggt
catcgtgcccgagtacttactggggaaagaacaatcaggatgcactacgcaaattgtaat
acgtacaatgcggatttcgatggtgacgagatgaatttgcatttcccgcagaacgaactc
gcaagagcggaggccatgcagttggccgataccgaccatcaatacctatcagccacagca
ggaaaaccactgagaggtttgatccaggaccatatttcaatgggaacatggttcaccagt
cgcgatacattttttgataaagatgactattatcagttactgtacagctgcttgcgacca
gaaaattcccacactgttaccgacaagattttacttatggagccgacgatcttacggccc
cagaaactttggactgggaaacaagtaatctccaccattatgatgaatattacaccagag
aggctccatggtttgaaccttacagggaaatcaagcactcgaggtgatcgttggggtgaa
ggctccgaggaaggacaggtcatttttcgggatggcgaacttctttgtggtattttggac
aaagcccaactgggtccaagcccccgcggcctcgtccattcagttcatgagatttatggg
catgttgttgctggaaaattgttaggtgttctaggtcgtttgctgacgaaattcttgcac
atgcgagcttttacttgcggcatggatgatcttcgcctgacgaaaaaaggaaacgaggct
cggaaacgaaaactagaagaagccgaagatataggccgcaaaatagcactcaaatatgtg
actttggatcaaactaaagtggaggatgaagaagctgagcttaaacgacgcctggaagac
gcgctccgtgatgacgcgaagcaggctggattagatgcggtttttaactcgcaaaccggc
aaattatcatctgagattacatccgcctgtcttccaaccgggctcgaaaagccattccca
tggaaccaaatgcaggcgatgacctcgtctggggctaaggggtctgttgtcaacgcgaat
ctcatttcttgcaacttaggccagcaggttcttgaaggtcgtcgagtccccgtgatgatt
agcgggaaaactttgccatcctttaggccttttgagaccagcctcatggccggtggtttt
atctctggacgctttcttacgggaataaagccacaagagtactattttcacgctatggct
ggtagagaaggccttattgacactgctgttaagacctcaagatctgggtatctccagcga
tgcttaattaagggaatggagggattaaaggcagaatatgacaacactgttcgcgagacc
gctgacggatcggtcatgcagttcctctacggtgaagatgggctcgagattatcaagcag
aaccatctacaagacttcacctttttggcccagaatttctggtctgtcgttgaagagctt
aatgggtctgacgagttaaataaggttaaggacgacaaggcgggagagtggaatcaaaat
gcaatcaaaaaactgagaaagacgggcaaattggactgtgtggaccctgcactttccctt
tttcctccagggtcctgctatggaagtacttcagaatctttcgcaatggctttaagaaag
tatcaaaaagaaaatcccgataaattgctaaaagaaaagggcaagaccgagagcagaatt
tccaaaaaggatttcactagggtgatgaatatgaaatatatgagatcggttgtggagcct
ggtgaatccgtggggattgttgctgggcagtcgattggcgagccgtccacccagatgact
ctcaacacgttccatttggctggacattcagcgaagaacgtaacgcttggtattcctcgc
ctgcgcgaaattgttatgacagccagtgataaaatacttacgccaactatgacgggtgtc
ttgaacaagcagcttaccgaaaaggatggaagggtttttgctaaagcgattagcaagctt
accctcgcggaggtcgtggacactcttagagtccatgagcgcatttcatccggatctagc
cgtgggaaggcaaaaatatacgacatagaaatagactttttccccccagatgagtacacc
gaagaatatgccatccagattgaagatattctcaaaacactccagcacaagtttgtacca
cggcttgtcaaattaacacgcgcagagttgaagaaacgaatagatgagaaatcattatct
actttctcctctgcccagcctgacatcggtacttccgcgggagtgatagaggagtctacg
aggcgttttgggcgtgaagccagagacggcgatgatgataatgacgacgacgaggaggaa
gaccaagacgatgcgaaacgggcaatggcaaacatgaatcgctccaatcaagtctcctac
gaagatcctgatgaaggagaggaagcaattatacgcgaacaagattccgaagagccagac
tccgatgacaatgaagaggctgagggcaaccgccatggcgacgggactgcgactgaagat
gtcgacatgccagacgcagacgccgattctgactcggaaaaaatacaaaagagtaaagag
agcgaagacaccatcattgggaaacatgctgaaatcacaaagttcaagttcaaccttaaa
aaaggcaaatcttgtcatattcagctacgatatgatatctcgacgcccaagcttctgctc
ctccctctcgtcgaagatgctgttcggacctccgtgatccaattcgtcaaggggctggga
acctgtacttacattgaggccgacgataaagagccagcacatatcgtcactgacggtgtc
aacttgttagccatgcgagattaccaggattacgtctaccctcattcgttatacaccaat
tcaattgccgacatgctcctgatgtacggagttgaggctgcccgtgcatctataattcgt
gaaatggctgccgttttcgatagtcacagcatttcggttgataatcgtcatcttaatctc
attggtgatgttatgacccatgctggtggtttccgcgcgtttaaccgcatgggcctggtg
aaggatagcacttcgccgtttatgaagatgagcttcgagaccaccgttgggttcttgaga
gacgctgtgctggagagggactgggacaacctggacagccctagtagtaggattgtcatg
ggacgcgttggaacgatcggcactggtgcttttgatgtacttgctcctgttggctga
DBGET
integrated database retrieval system
