Blastomyces gilchristii: BDBG_08433
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Entry
BDBG_08433 CDS
T06540
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03020
RNA polymerase
bgh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BDBG_08433
09124 Replication and repair
03420 Nucleotide excision repair
BDBG_08433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgh03021
]
BDBG_08433
03400 DNA repair and recombination proteins [BR:
bgh03400
]
BDBG_08433
Enzymes [BR:
bgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BDBG_08433
Transcription machinery [BR:
bgh03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
BDBG_08433
DNA repair and recombination proteins [BR:
bgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
BDBG_08433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
8501815
NCBI-ProteinID:
XP_002621402
UniProt:
A0A179UZA4
LinkDB
All DBs
Position
Unknown
AA seq
1746 aa
AA seq
DB search
MTSVKFPYSKAQLRTIKEIQFGLLSPEEIKRMSVVHVEYPETMDEQRQRPREKGLNDPRL
GTIDRNWRCATCEEGINDCPGHFGHIELSTPVFHIGFLTKIKKLLETVCHNCGKIKANTT
DQKYLEALRFRDPKRRFDAIWRLSKDVLICEADPSPDDDDPFGKEPSKPVHSHGGCGNIQ
PQIRKEGISLVGTWKPSKNRDMMDDMDVQQPEKRQITPQMALNIFKTISEEDVRLMGLSN
DYARPEWMIITVLPVPPPPVRPSVLVGGSGSGQRGEDDLTYKLAEIVRANQNVTRCEQEG
SPEHVVREFESLLQYHVATYMDNDIAGQPQAMQKSNRPVKAIRGRLKGKEGRLRQNLMGK
RVDFSARTVITGDPNLSLDEVGVPLSIAQTLTYPEVVTPFNIAKLGELVDNGPDIHPGAR
YVIRNTGERIDLRLHKGGGGRNFLQYGWRVERHIVDGDVILFNRQPSLHKESMMGHRIRV
MPYSTFRLNLSVTTPYNADFDGDEMNLHVPQSEEARAELSQLCMVPLQIVSPQRNGPLMG
IVQDTLCGIYKICSRDVFLTKEQIMNILLWVPDWDGVIPQPAILKPRPRWTGKQVISMVL
PAGLNLLRVDRDKAPLSEKFSPLTDGGLLVHSGELMYGMFSKKTVGATGGGIIHTIFNEY
GPELAMNFFNGAQTVVNYWLLHHGFSIGIGDTIPDLATIQKIEEAVRVRKEEVDEITASA
TDNTLEPLPGMNVRETFESKVSRALNNARDEAGTETEKSFKDLNNAVQMARSGSKGSIIN
ISQMTAVVGQQSVEGKRIPFGFKYRTLPHFTKDDYSPESRGFVENSYLRGLTPTEFFFHA
MAGREGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVVQFLYGEDGLDGAH
IENQRVDIIKCSDERFRDRYRIDLMDPERTLSPNVLEQATEIAGDIEVQKYLDEEWEQLL
KDRAFMRSVAKEDEEMMQLPINVQRILESAKTIFRIREGAISDLHPAEVIPQIRALLDRL
IVVRGDDVISREAQESATLLFKAQLRSRLAFRRLVVEYSLNRLAFQHVLGAIESRFSKAM
ANPGEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVATHIKTPSMT
VYQDPSRAMDKESVKQLRSVVEHTSLRSVTEATEIYYDPDIQSTVIEADRDMVESYFIIP
EDVADDSSHQSKWLLRIILSRPKLLDKSLTVQDVAMKIKDAYPQDIAVIFSDNNADEQVI
RIRQIQDSKQDDDDDDTEYDVTLKKLESHLLDTLTLRGVAGIERAFINEKSRVRVLEDGS
LYQSAEDPLCKEWVLETSGSALGEVLTIPGVDTTRTYSNQFIEILEVFGIEATRTALLRE
LTQVLAFDGSYVNHRHLALLVDVMTSRGFLMAVTRHGINRADTGALMRCSFEETVEILLD
AAAFAELDDCRGVSENLILGQMAPAGTGEFDVYLDQDMLMGVVSSNAGLMTDGKGLLGDG
AATPYDSSSPLRDNMYIGSPDPDSNFSPIRQAGSETPAGFTEYQPSGFSGGFSPHGARSP
GGGYSPTSPFNTSPTSPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPAFAPTSPAYS
PTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGIS
TGRHLSPTSPTSPKYTPTSPGWSPTSPETYSPTSPNFSGSPTSPGGPTSPGYSPTSPTFN
PTSPRQ
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgtcaaattcccctactcgaaggcgcagctgcgcacgattaaggagatccaa
tttggtcttctctcgcccgaggagatcaagaggatgagcgtggtccatgtggagtatcct
gagaccatggatgagcaacggcaacgcccacgggagaaaggtttaaatgaccctcgtctc
ggtaccatcgatcggaactggcgctgcgctacctgcgaagagggaatcaacgactgtcct
ggacattttgggcatatcgagctatctactcctgtgttccatattggtttcctgactaaa
atcaagaaacttttggaaactgtttgccacaattgtggaaagatcaaggcaaatacgacc
gaccaaaagtatttggaagcgctgcgtttccgcgacccaaagcgacgctttgatgcgatt
tggcggctgtcaaaagatgtcttgatatgtgaagctgatcctagcccagatgatgatgac
cctttcggcaaggaaccttccaagcctgtgcactctcacggtggatgcggaaatattcag
ccacaaattcgtaaagaagggattagtttggttgggacctggaagcctagcaagaaccgt
gatatgatggacgatatggacgtacaacagcctgagaagagacagatcactccgcagatg
gcccttaacatatttaaaaccatctcagaggaggatgttcgtttgatggggttgagcaac
gattatgccagaccagagtggatgatcatcacagttcttcccgttcctccgccaccagtc
cgtcccagtgttctcgtcggcggtagtgggagtggccaacgtggagaggacgacctaaca
tataaactggcagagattgttcgtgcgaatcagaatgtcaccagatgcgaacaggaagga
tctcctgagcatgtggtccgtgaatttgagtctcttttgcagtatcatgttgcaacctat
atggacaacgatattgccggacagccacaagctatgcaaaagtctaatcgacctgtcaaa
gctatccgtggtcgtctgaagggtaaggaaggccgcctgcgtcaaaacttgatgggaaaa
cgtgtcgatttttcggctcgtacggttattaccggtgatccgaatctgtctttggacgaa
gttggagttccgctcagcattgctcagactttaacttatccggaggtcgtcactcctttc
aacattgccaagctaggtgaacttgttgataacggccccgatattcatcctggtgcccgt
tatgttatccgcaacacaggcgaacgtatcgacttgcgccttcacaagggtggaggtggg
agaaactttttgcagtatggatggagagtggagcgtcatatcgtggatggcgatgtgatc
ctattcaatcggcagccgtccttgcacaaggaatctatgatgggtcaccgtattcgcgtc
atgccgtactcgactttccgactaaatctgtccgttaccaccccctacaacgctgatttc
gacggtgatgaaatgaacttgcacgttccacaaagcgaggaggcccgcgctgagctcagt
caactttgcatggtgcccttgcaaattgtatcccctcaacgaaacggcccgttgatgggt
atcgtgcaggacactctttgtggaatctacaaaatctgcagtcgtgacgttttcttaacg
aaagagcagatcatgaatattctactttgggtccctgattgggatggcgtaataccccag
ccagccattttgaaacccaggccgaggtggactggaaaacaagtgatcagcatggtcctt
cctgctggtctgaaccttcttcgggttgatcgagacaaggcacccctttcggagaaattc
tcccctctaactgatggtggactgttagtacacagtggcgaacttatgtacggaatgttt
tccaaaaagacggttggagcaacaggtggaggtatcattcatactattttcaacgagtat
ggacctgaactggcgatgaatttcttcaatggggcccaaaccgtcgtgaactactggcta
ctacaccacggtttcagtattggaattggtgatacaattccggatctagcgacgatccag
aagattgaggaagcagttcgcgtgagaaaggaggaagttgatgagatcacagctagtgcg
acggataatactcttgagcccttgcctggtatgaatgtccgtgaaaccttcgagagcaaa
gtgtcccgcgcccttaacaatgcccgtgacgaggccggaacggagacagaaaagagcttt
aaggacttgaacaatgctgttcaaatggcgcgttctggttcaaagggctcgattatcaat
atttctcaaatgactgctgttgtcggccagcaatccgttgaaggaaaacgcatcccattc
ggtttcaaatatcgtactttgccacattttacaaaggatgattattcacccgagtctcgt
ggtttcgtcgaaaattcgtatctccgtggtcttacgcccacagagttcttcttccatgct
atggctggtcgtgagggtctgattgacactgctgtcaagacagctgaaacgggatatatc
caacggaagcttgtcaaggccctggaagaggtcatggttaaatacgatggtacagttcgc
aactcgcttggagatgttgtccagttcctgtacggagaggatggtttggacggcgcacat
atagaaaatcaacgtgtcgatattattaaatgctcggatgagagattccgcgacagatat
cgaatcgatctgatggaccccgaaaggactctctcgcccaacgtgttggaacaagctacg
gaaattgccggcgatatcgaggtacagaagtatcttgacgaagaatgggaacagctcttg
aaggaccgggcctttatgcgtagcgttgccaaagaggacgaggaaatgatgcagctgcca
atcaatgtccagcgaattctcgagtcggcgaaaacgatattcagaattcgagaaggtgcc
attagcgacttgcatcctgcagaggtcatacctcaaatcagagccctactggaccgcctt
atcgttgttcgtggtgacgatgtgatttcccgggaagcacaagaaagcgccaccctactc
ttcaaggctcagctccgctcccgccttgcattccgcagacttgtggtggaatactctctt
aaccggctcgcattccagcacgtactgggtgctatcgaaagtcgattctccaaggcgatg
gcaaacccgggtgaaatggttggtgtcttggctgcacaatcaattggagagccagcaaca
cagatgacgttgaacacattccattttgctggtgtttcgtccaagaacgttaccctcggt
gtgcctcgtctgaaggaaattctcaatgtggccacgcacatcaaaactccttctatgact
gtatatcaggaccctagtcgtgctatggacaaggagtctgtcaagcaactccgcagcgtt
gttgagcataccagtctgaggtctgttacggaagcgacggagatctactatgaccctgat
atccaatctacagtgattgaagcggaccgtgacatggttgaatcctacttcattatcccc
gaggatgtcgcagatgattcgagccatcagtcgaaatggttgcttagaatcatcttgagt
cgaccgaagctccttgacaagagtcttacagtccaagatgttgcaatgaaaatcaaagac
gcttatccgcaagatattgctgttattttcagtgataacaacgctgacgagcaggtcatc
cgtatccgacaaatccaagactctaagcaggatgacgatgatgatgacactgaatacgat
gtaactctaaagaagctggaaagccacttgcttgatacccttactttacgaggcgtggct
ggcatcgaacgcgcattcatcaatgagaaatcgagagtccgtgtcttggaggatggatct
ctctatcaaagcgccgaggacccgttgtgtaaggagtgggttcttgaaaccagtggatcc
gccctcggcgaagtcctgaccatccctggagttgatacaactcgcacgtactctaatcag
ttcattgagattcttgaagtattcggaatcgaagctactcgaactgcacttttgcgagaa
ttaacccaggtgcttgcatttgatggatcatacgtcaaccaccgtcatttggccctcctc
gtcgatgttatgacttcacggggcttcctcatggcagtcaccagacatggtatcaatcgt
gctgatactggcgctctgatgagatgttcttttgaggaaacagtggagatcctacttgac
gccgctgcgtttgcagagctggatgactgccgtggtgtatctgagaatctgatcttagga
cagatggccccagctggaactggggagtttgatgtctacctggatcaggatatgctcatg
ggagtcgtttcgagcaatgctggtctaatgactgatggcaaaggattacttggtgacgga
gcggctactccatacgatagcagctcccctttgcgggacaacatgtacattggatcacca
gaccctgactccaatttctccccaatcagacaagctggatccgagacgcctgcagggttc
accgaatatcagccctccgggttcagcggtggcttcagccctcatggagcaagaagccca
ggtggaggttattcgcctaccagcccgttcaataccagcccaacttctcctcgctactct
ccatcgtctggctactccccgacttctcctggtatgagcattacgagtcctcgattcatg
tcctctcctgggttttcacccgccagtccggctttcgcgcccacttcgcctgcctattca
ccaacttctccaggctaccaacagtcgccaacttcgccatcgtattctcctacctcacct
ggtttctcccccacatcccctagttatagcccaacgtctcccagcttcagtcctgcctcg
cctgcattcagtcctacttctcctagctatagccctacgagtcctgccctcggcatatcg
actggaagacatctttccccgacatctcctacatctcccaaatatacacccacgtcccct
ggctggtctccaactagtccggaaacctactcacctacctctcccaacttctcgggctcg
ccaacttctccgggtggcccaacatctcctggctacagcccgacctcccctaccttcaac
cctacatctcctcgccagtag
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integrated database retrieval system
