Alkalicoccobacillus gibsonii: BGM20_08750
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Entry
BGM20_08750 CDS
T04820
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
bgi
Alkalicoccobacillus gibsonii
Pathway
bgi00730
Thiamine metabolism
bgi01100
Metabolic pathways
bgi01240
Biosynthesis of cofactors
bgi04122
Sulfur relay system
Module
bgi_M00895
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/glycine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BGM20_08750
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BGM20_08750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgi03016
]
BGM20_08750
Enzymes [BR:
bgi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
BGM20_08750
Transfer RNA biogenesis [BR:
bgi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BGM20_08750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
UPF0227
Motif
Other DBs
NCBI-ProteinID:
AOL30718
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All DBs
Position
complement(1682787..1683992)
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AA seq
401 aa
AA seq
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MNYDHILIRFGEISTKGKNRKSFIERLKQNIRLVLKDYPNLKYFSNRDRMTITLNGEDPE
ALFPHLKQVFGIQSFSLAIKCDSRLDDIKATALKAIKDQYKPGDTFKVATKRAYKQFELD
TNQMNAEIGGHILRNTEGLTVDVRNPDIPLRIEIREEATFLTIRDEKGAGGLPVGSAGKA
MLMLSGGFDSPVAGFYAMKRGLSVEAVHFFSPPYTSERAKQKVMDLAKCLSRFGGSMTLH
IVPFTKTQELIQKQIPENYTMTATRRLMLQIADRIREKRNGLAIITGESLGQVASQTLES
MYAINAVTSTPILRPLIAMDKTEIIEKSREIGTYETSIQPFEDCCTIFTPPSPKTRPKKE
KIEHFESFVDFEPYIQEAVDNIETMTLYSEQEANDKFAELF
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgatcatatattaattcgttttggggaaatttcgaccaaaggcaaaaacaga
aaaagctttattgagcgcttaaaacaaaacatcagactcgttttgaaagactatccgaat
ttaaaatacttttccaacagggatcgtatgacgattacattaaatggagaggatcctgag
gctctttttcctcatttaaagcaagtgtttgggattcaaagcttcagcctggcaattaaa
tgtgacagccgccttgatgatattaaggcaaccgcactaaaggctatcaaagatcagtat
aaaccaggtgatacgtttaaagtcgcgacaaagagagcgtataagcaatttgaattagat
acaaaccagatgaacgctgaaatcggcggccatattttgcgaaatacagaaggattgacg
gtcgatgttcgcaacccagacatcccgctcagaatcgaaatcagggaagaagcaacattt
ttgacaattcgtgatgaaaaaggtgcaggcgggctgccagttggttcagcaggaaaagcg
atgctgatgctttctggcggttttgacagccctgtggccggtttttatgcgatgaaacgg
ggattgtcggtagaagctgttcatttcttcagcccgccatacacaagcgagcgcgcaaag
caaaaggtaatggatctggcgaaatgtctgtcccgttttgggggaagcatgacacttcat
attgttccatttacaaaaacgcaagagctcatccaaaaacaaattcctgaaaattacaca
atgacggcaacccgccgcctcatgcttcagatagccgacagaatcagagaaaagagaaac
gggcttgccattattacgggagaaagcctcggtcaggtagcgagccaaacgcttgaaagc
atgtatgcaattaatgcggtgacgtcaacaccgattttgcgtccgctaatcgccatggac
aaaacagaaatcatcgaaaaatcacgggaaattggcacatatgagacaagcattcagccg
tttgaagactgttgcacgatctttacaccgccaagcccgaaaacacgccctaaaaaagag
aaaattgaacactttgaaagctttgttgatttcgagccgtatattcaagaagcggtagat
aacattgagacaatgaccctgtatagcgaacaagaagctaacgataaattcgctgaactc
ttttaa
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