Alkalicoccobacillus gibsonii: BGM20_16040
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Entry
BGM20_16040 CDS
T04820
Name
(GenBank) antibiotic ABC transporter ATP-binding protein
KO
K18104
ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:
7.6.2.2
]
Organism
bgi
Alkalicoccobacillus gibsonii
Pathway
bgi01501
beta-Lactam resistance
bgi02010
ABC transporters
Module
bgi_M00700
Multidrug resistance, efflux pump AbcA
Brite
KEGG Orthology (KO) [BR:
bgi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BGM20_16040
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BGM20_16040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bgi02000
]
BGM20_16040
01504 Antimicrobial resistance genes [BR:
bgi01504
]
BGM20_16040
Enzymes [BR:
bgi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
BGM20_16040
Transporters [BR:
bgi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BGM20_16040
Antimicrobial resistance genes [BR:
bgi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
BGM20_16040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_23
AAA_21
AAA_29
ABC_ATPase
AAA_22
AAA_30
nSTAND1
MMR_HSR1
YebG
nSTAND3
DUF3987
Motif
Other DBs
NCBI-ProteinID:
AOL32012
LinkDB
All DBs
Position
3093377..3095134
Genome browser
AA seq
585 aa
AA seq
DB search
MGNNHLLLLLKLVKWPKKILVYILFSLLFTTILSLVIPILTKNTVDQFTDGTVNWALTIM
LAGLFLINILLSGLSFYYLAFLGENATYYIRDKMFSHILDLPLTFFDKNESGQIVSRVID
DVELMNTFISDKIPNFASQLIVVAGSLILLFVLDWKITLLMLISVPISLAVMIPLGNKMY
KISLEKQNNMAIFTARISSAFSGIRLTKSYTAEKEEYGKGNVILKRIFKLNLKDTKIQAY
MMPIMSTVILMIILLLVGYGGIRLSEGTISPGTFVAIIFYLVQFVTPLSSLSNFFTEYKK
TLGATKRLYEIYSLKPEAENKQISSNAFNLGNGDLKFENISFQYNDPSSEVFNKLNLRFP
KNKITAVVGPSGAGKSTLFNLIERLYEAQNGEIYYESTPIKDIDLTVWRKKIGYVMQDTL
MITGTIKENLTYGLSGSVSQETIIKYSKLANAHDFIMELPDNYETFIGERGIKLSGGQKQ
RIAIARALIKNPEILLLDEATSNLDSESEILVQQSINRLVRDRTTIIIAHRLSTIRDADN
IVFLENGVVTGSGNHLDLINNHEKYREFVNGQLLNNTSISASSLS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgggcaataaccatttactattactgcttaaacttgttaaatggccaaaaaaaatatta
gtatatattttattttcattactatttacaactatactatccttggtaataccaatattg
actaaaaatactgttgatcaattcactgatggaacagtaaattgggccttaacaataatg
ttagcaggtttatttctcataaatattttattaagtggattatctttttattatctagca
tttttaggtgagaatgcgacttactatatacgagataaaatgttttctcatattttagat
ttacctctaacgttttttgataaaaatgaatctggtcaaattgtaagtagagttatagat
gatgttgagttaatgaatacttttatttctgacaagataccaaactttgcttctcaattg
atagtagttgccggatcattaattcttctgtttgtgctggattggaaaataacattactt
atgttgatttctgttcctatttcattagctgttatgattccattggggaataagatgtat
aaaatttctttagaaaaacaaaataatatggcaatatttactgcaagaataagtagtgca
ttttcaggaattagacttacaaaaagttatactgcagaaaaagaagagtatgggaaaggt
aatgtcattttaaaaagaatttttaagcttaatctaaaagatactaagatacaagcttat
atgatgcctattatgtctactgttatactaatgataatattattgttagtggggtatggg
gggataaggttatcggaaggaactatttcaccaggtacctttgttgcaataattttttac
ttagttcaatttgttacacctctttcctctctgtctaacttttttactgaatataaaaaa
acactaggtgcaacaaaaagattatatgaaatatattcactaaaacccgaggccgaaaat
aaacaaattagcagtaatgcatttaacttgggaaatggggatctgaaatttgagaacatt
tcgtttcagtataacgatccttcttctgaagtatttaacaaactgaatttgcgttttcca
aaaaataagataacagctgttgtaggtccttctggagctggaaaatcaactttatttaat
ttaatagaacgtttgtatgaagctcaaaatggtgaaatctattatgaatcaactcctata
aaagacattgatttgactgtttggagaaaaaaaattggttatgtaatgcaagatactttg
atgatcaccggcacgataaaagagaacctgacgtacggtttatcaggctctgtatctcaa
gaaactataattaaatattctaaattagccaatgcccatgattttattatggagcttcca
gataattatgaaacctttattggagaaaggggtataaaattatcaggtggtcaaaaacaa
agaattgcaatagcaagagcattaattaaaaaccctgaaatacttttattagatgaggca
acttctaatttagacagtgaaagtgaaatattggtacaacaatctataaatagactagtt
cgagatagaaccactattattatagctcatagattgtcaacaattagagatgcagataac
attgtatttttagaaaatggagtggttacaggaagcggtaatcatttggacctaataaat
aaccatgaaaaataccgagagtttgttaacggtcaattgctaaataacacttcaataagc
gcgagttctctaagttaa
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