Brenneria goodwinii: AWC36_19660
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Entry
AWC36_19660 CDS
T05061
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bgj
Brenneria goodwinii
Pathway
bgj00540
Lipopolysaccharide biosynthesis
bgj01100
Metabolic pathways
bgj01250
Biosynthesis of nucleotide sugars
Module
bgj_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bgj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AWC36_19660 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bgj01005
]
AWC36_19660 (rfaD)
Enzymes [BR:
bgj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
AWC36_19660 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bgj01005
]
Core region
AWC36_19660 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
ATA26153
UniProt:
A0A0G4JTY5
LinkDB
All DBs
Position
complement(4507931..4508863)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDIGYRDILVVDNLKDGTKFVNLVDLDITDYMDKEDFIANI
IAGDNLGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKEVLHYCLDRNIPFLYASSAATY
GGRDNNFIEERKYEQPLNVYGYSKFLFDQYVREILPQAESQICGFRYFNVYGPREGHKGS
MASVAFHLNRQINQGENPKLFAGSENFKRDFIYVGDVAAVNLWFWQKGVSGIFNCGTGRA
ESFQAVADATLAFHKKGSVEYIEFPEKLKGRYQAYTQADLTKLRAAGYDKPFKTVAEGVA
EYMAWLNRTA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttactggcggcgccggtttcatcggcagcaatatcgtgaaagcgctcaat
gacattggctatcgggatatcctggttgtcgataacctgaaagatggaacgaaattcgtc
aatctggtggatctggatattacagactacatggataaagaagatttcatcgccaatatc
atagcgggtgacaatctgggcgatattgatgccattttccacgaaggcgcctgctcatcg
accaccgagtgggatggcaagtatatgatggataacaactatcaatactccaaagaggtg
ctgcactattgcctcgatcgcaatatcccgttcctgtacgcctcttccgccgcgacctat
ggcggtcgtgacaataacttcattgaagagcgcaagtatgagcagccgctgaacgtctat
ggctactctaaattcctgttcgaccaatacgtgcgtgaaattctgccgcaggccgagtcg
caaatttgcggcttccgctatttcaacgtctacggcccgcgtgagggacacaaaggcagc
atggccagcgtcgcctttcacctgaacagacagatcaatcagggtgaaaatccgaaactg
tttgccggcagcgaaaacttcaaacgggacttcatatacgtcggcgacgtcgcggccgtc
aatctgtggttttggcaaaaaggcgtgtccggcatcttcaactgcggcaccggccgggct
gaatctttccaggccgttgccgacgccacgctggcgttccacaaaaaaggcagcgtggaa
tatattgaattcccagaaaagctaaaaggccgttatcaggcatatacacaggcggacctg
actaaactgcgcgcggcaggttacgacaagccgtttaaaaccgttgccgaaggcgtcgct
gaatatatggcctggctaaaccgtaccgcttaa
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