KEGG   Bordetella genomosp. 13: CAL15_10420
Entry
CAL15_10420       CDS       T05441                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bgm  Bordetella genomosp. 13
Pathway
bgm03030  DNA replication
bgm03410  Base excision repair
bgm03420  Nucleotide excision repair
bgm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bgm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CAL15_10420
   03410 Base excision repair
    CAL15_10420
   03420 Nucleotide excision repair
    CAL15_10420
   03440 Homologous recombination
    CAL15_10420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bgm03032]
    CAL15_10420
   03400 DNA repair and recombination proteins [BR:bgm03400]
    CAL15_10420
Enzymes [BR:bgm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CAL15_10420
DNA replication proteins [BR:bgm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CAL15_10420
DNA repair and recombination proteins [BR:bgm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CAL15_10420
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CAL15_10420
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc LRV
Other DBs
NCBI-ProteinID: ARP97383
UniProt: A0A1W6ZIZ7
LinkDB
Position
complement(2307541..2310258)
AA seq 905 aa
MKKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVADHKAEYAACIFDA
RGKTFRDDLYPEYKSHRPPMPEDLSAQIEPIHRVVRALGWPVLAIEGVEADDIIGTLACQ
AAAQDVNVIVSTGDKDMAQLVNEHVTLVNTMSGEVLDPAGVRAKFGVPPERIVDYLMLIG
DSVDNVPGVTKVGPKTAVKWLDEHGSIEQLVAQAATVKGVAGENLRAAIGQFPLTRQLLT
VKCDCDLTGHIAGLDDLTPAEPDTTTLMECYDRYGFRTWLRELSGDAQRLPAGDARVVVE
APAAPAEQDYRIITDWAGFDAWMALVQDAGLVALDTETTSLSEMQAALVGVSMGVAPGRA
CYIPLAHRGPEAGEQLPKQEVLQRLRSWLEDPSRPKLLHHAKYDTHVFANEGIRLGGISD
DTMLQAYVLESHRGVGLAELSQRYLGRSGLSYEDLCGKGAKQIGFDEVAVDKAGHYACED
ADFTLQLHQALRPRVAADAGLEFIYQLEMQVSGVLTVIERNGVRVDAQELARQSHKLGQD
MLQLEQRAYELAGQPFNLNSPKQLGEILFGRMQLPVVRKTASGAPSTDEEVLSRLAQDYP
LPQALLEYRGLSKLKSTYTDKLPRMINPATGRVHTHYSQAAVITGRLASSDPNLQNIPVR
TEAGRRVREAFIAESGMLLSADYSQIELRIMAHVSDDANLQQAFAAGEDIHRATAAEVFG
VPLDEVVAEQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFARYPGVASYMD
MTRQLARERGYVETVFGRRLQMPDIRAASGPRRQGAERAAINAPMQGTAADLIKMAMVAV
QRWLDEQQLRSRMIMQVHDELVLEVPDEELDLVREALPRLMCEVATLKVPLVAEVGVGKN
WEQAH
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgaagaaaaccttattgctggtagacggatctagctacctgtaccgcgcgttccatgcg
atgcccgacctgcgcaacgcgcagggcgaacccacgggcgcgctgtacggagtcgtgaac
atgctgcgcaagctcgtagcggatcataaggcagagtatgccgcatgcatcttcgatgcg
cgcggcaagacattccgcgacgacttgtatccggaatacaagtcgcatcggccgcccatg
cccgaggacctatcagcacagatcgagcccatccaccgcgtggtgcgcgcgctgggctgg
ccggtgctggccatcgagggcgtggaagccgacgacatcatcggcacgctggcctgccag
gcggccgcgcaggacgtcaacgtcatcgtgtccaccggcgacaaggacatggcccagctg
gtgaacgagcacgtcaccctggtcaacaccatgagcggcgaggtgctggatcccgccggg
gtgcgcgccaagttcggcgtgccgcccgagcgcatcgtcgactacctgatgctgatcggc
gacagcgtcgacaatgtccccggcgtcaccaaggtcgggcccaagacggccgtgaagtgg
ctggacgagcacggctcgatcgagcagttggtggcccaggcggccacggtgaagggcgtc
gccggcgagaacctgcgcgccgccatcggccagttcccgctgactcgccagctgctgacg
gtgaagtgcgactgcgatctcaccggccacatcgccggcctggacgacctcacgccggcc
gagcccgacaccacgacgctgatggagtgctatgaccgctacggtttccgcacctggctg
cgcgaactgagcggcgatgcgcagcgcctgcccgcgggcgatgcccgcgtggtggtcgag
gcgcccgccgccccggccgaacaggactatcgcatcatcaccgactgggccggcttcgac
gcctggatggcattggtgcaggatgcgggactggtggcgctggataccgagaccacctcg
ctgtcggaaatgcaggctgcgctggtgggcgtgtcgatgggcgtggcgccgggcagggcc
tgctacatcccgctggcgcatcgcggcccggaggccggcgagcaattgcccaagcaggaa
gtgctgcagcggctgcgctcctggctggaagatccgtctcgccccaagctgctgcaccat
gccaagtacgacacgcacgtgttcgccaacgagggcatccgattgggcggtatctcggac
gacacgatgctgcaggcgtacgtgctggaatcgcaccgcggcgtgggcctggccgagctg
tcgcaacgatatctgggccgcagcggcctgtcgtacgaagacctgtgcggcaagggcgcc
aagcagatcggcttcgacgaagtggcggtggacaaggccggccactacgcgtgtgaagat
gccgacttcacgctgcagctgcatcaggccctgcggccgcgcgtggccgccgatgcggga
ttggagttcatctaccagctcgagatgcaggtgtcgggcgtgctgacggtgatcgaacgc
aacggcgtgcgcgtcgatgcgcaagagcttgcgcgccagagccacaagctgggccaggac
atgctgcagctcgagcagcgcgcctacgagctggccggccagcctttcaacctgaattcg
cccaagcagctgggcgagatcctgttcggccgcatgcagctgccggtggtgcgcaagacg
gccagcggcgcgccgtccaccgacgaagaggtgctgtcgcgcctggcgcaggactatccc
ttgccgcaggcgctgctcgaatatcgcgggctgtccaagttgaagtccacgtataccgac
aagctgccgcgcatgatcaacccggccaccggccgcgtgcacacgcactactcgcaggcc
gcggtaatcacgggccgcctggcctcgtccgatccgaacctgcagaacattccggtgcgc
accgaggcgggccgccgcgtgcgcgaggccttcatcgcggaaagcggcatgttgctgtcg
gcggattattcgcagatcgagctgcgcatcatggcgcacgtgtccgacgacgcgaatctg
cagcaggcgttcgcggcgggcgaggacatccaccgcgcgaccgccgcggaggtgttcggc
gtgccgctggacgaggtcgtggccgagcagcgccgcgcggccaaggcgatcaatttcggg
ctgatctacggcatgggagtgttcggcctggcgtcgaacctgggcatcacgcgggacgcg
gcgcaggcctatatcgaccgctatttcgcgcgctatccgggcgtggcgagctacatggac
atgacgcgccagctggcccgcgaacgcggctatgtggaaacggtgttcggccgccgcctt
cagatgcccgacatccgcgcggcctcgggcccgcgccgccagggcgccgaacgcgccgcg
atcaacgcgcccatgcagggcacggcggccgacctcatcaagatggccatggtggcggtg
cagcggtggctggacgagcagcagctgcgctcacgcatgatcatgcaggtgcacgacgaa
ctggtgctcgaagtgcccgacgaagaactcgacctcgtgcgcgaggccttgccgcggctg
atgtgcgaggtggccaccttgaaggtgccgctggttgccgaggtgggcgtggggaagaac
tgggagcaggcgcactga

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