Bordetella genomosp. 13: CAL15_10420
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Entry
CAL15_10420 CDS
T05441
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bgm
Bordetella genomosp. 13
Pathway
bgm03030
DNA replication
bgm03410
Base excision repair
bgm03420
Nucleotide excision repair
bgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAL15_10420
03410 Base excision repair
CAL15_10420
03420 Nucleotide excision repair
CAL15_10420
03440 Homologous recombination
CAL15_10420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgm03032
]
CAL15_10420
03400 DNA repair and recombination proteins [BR:
bgm03400
]
CAL15_10420
Enzymes [BR:
bgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAL15_10420
DNA replication proteins [BR:
bgm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CAL15_10420
DNA repair and recombination proteins [BR:
bgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CAL15_10420
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAL15_10420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
LRV
Motif
Other DBs
NCBI-ProteinID:
ARP97383
UniProt:
A0A1W6ZIZ7
LinkDB
All DBs
Position
complement(2307541..2310258)
Genome browser
AA seq
905 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVADHKAEYAACIFDA
RGKTFRDDLYPEYKSHRPPMPEDLSAQIEPIHRVVRALGWPVLAIEGVEADDIIGTLACQ
AAAQDVNVIVSTGDKDMAQLVNEHVTLVNTMSGEVLDPAGVRAKFGVPPERIVDYLMLIG
DSVDNVPGVTKVGPKTAVKWLDEHGSIEQLVAQAATVKGVAGENLRAAIGQFPLTRQLLT
VKCDCDLTGHIAGLDDLTPAEPDTTTLMECYDRYGFRTWLRELSGDAQRLPAGDARVVVE
APAAPAEQDYRIITDWAGFDAWMALVQDAGLVALDTETTSLSEMQAALVGVSMGVAPGRA
CYIPLAHRGPEAGEQLPKQEVLQRLRSWLEDPSRPKLLHHAKYDTHVFANEGIRLGGISD
DTMLQAYVLESHRGVGLAELSQRYLGRSGLSYEDLCGKGAKQIGFDEVAVDKAGHYACED
ADFTLQLHQALRPRVAADAGLEFIYQLEMQVSGVLTVIERNGVRVDAQELARQSHKLGQD
MLQLEQRAYELAGQPFNLNSPKQLGEILFGRMQLPVVRKTASGAPSTDEEVLSRLAQDYP
LPQALLEYRGLSKLKSTYTDKLPRMINPATGRVHTHYSQAAVITGRLASSDPNLQNIPVR
TEAGRRVREAFIAESGMLLSADYSQIELRIMAHVSDDANLQQAFAAGEDIHRATAAEVFG
VPLDEVVAEQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFARYPGVASYMD
MTRQLARERGYVETVFGRRLQMPDIRAASGPRRQGAERAAINAPMQGTAADLIKMAMVAV
QRWLDEQQLRSRMIMQVHDELVLEVPDEELDLVREALPRLMCEVATLKVPLVAEVGVGKN
WEQAH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaccttattgctggtagacggatctagctacctgtaccgcgcgttccatgcg
atgcccgacctgcgcaacgcgcagggcgaacccacgggcgcgctgtacggagtcgtgaac
atgctgcgcaagctcgtagcggatcataaggcagagtatgccgcatgcatcttcgatgcg
cgcggcaagacattccgcgacgacttgtatccggaatacaagtcgcatcggccgcccatg
cccgaggacctatcagcacagatcgagcccatccaccgcgtggtgcgcgcgctgggctgg
ccggtgctggccatcgagggcgtggaagccgacgacatcatcggcacgctggcctgccag
gcggccgcgcaggacgtcaacgtcatcgtgtccaccggcgacaaggacatggcccagctg
gtgaacgagcacgtcaccctggtcaacaccatgagcggcgaggtgctggatcccgccggg
gtgcgcgccaagttcggcgtgccgcccgagcgcatcgtcgactacctgatgctgatcggc
gacagcgtcgacaatgtccccggcgtcaccaaggtcgggcccaagacggccgtgaagtgg
ctggacgagcacggctcgatcgagcagttggtggcccaggcggccacggtgaagggcgtc
gccggcgagaacctgcgcgccgccatcggccagttcccgctgactcgccagctgctgacg
gtgaagtgcgactgcgatctcaccggccacatcgccggcctggacgacctcacgccggcc
gagcccgacaccacgacgctgatggagtgctatgaccgctacggtttccgcacctggctg
cgcgaactgagcggcgatgcgcagcgcctgcccgcgggcgatgcccgcgtggtggtcgag
gcgcccgccgccccggccgaacaggactatcgcatcatcaccgactgggccggcttcgac
gcctggatggcattggtgcaggatgcgggactggtggcgctggataccgagaccacctcg
ctgtcggaaatgcaggctgcgctggtgggcgtgtcgatgggcgtggcgccgggcagggcc
tgctacatcccgctggcgcatcgcggcccggaggccggcgagcaattgcccaagcaggaa
gtgctgcagcggctgcgctcctggctggaagatccgtctcgccccaagctgctgcaccat
gccaagtacgacacgcacgtgttcgccaacgagggcatccgattgggcggtatctcggac
gacacgatgctgcaggcgtacgtgctggaatcgcaccgcggcgtgggcctggccgagctg
tcgcaacgatatctgggccgcagcggcctgtcgtacgaagacctgtgcggcaagggcgcc
aagcagatcggcttcgacgaagtggcggtggacaaggccggccactacgcgtgtgaagat
gccgacttcacgctgcagctgcatcaggccctgcggccgcgcgtggccgccgatgcggga
ttggagttcatctaccagctcgagatgcaggtgtcgggcgtgctgacggtgatcgaacgc
aacggcgtgcgcgtcgatgcgcaagagcttgcgcgccagagccacaagctgggccaggac
atgctgcagctcgagcagcgcgcctacgagctggccggccagcctttcaacctgaattcg
cccaagcagctgggcgagatcctgttcggccgcatgcagctgccggtggtgcgcaagacg
gccagcggcgcgccgtccaccgacgaagaggtgctgtcgcgcctggcgcaggactatccc
ttgccgcaggcgctgctcgaatatcgcgggctgtccaagttgaagtccacgtataccgac
aagctgccgcgcatgatcaacccggccaccggccgcgtgcacacgcactactcgcaggcc
gcggtaatcacgggccgcctggcctcgtccgatccgaacctgcagaacattccggtgcgc
accgaggcgggccgccgcgtgcgcgaggccttcatcgcggaaagcggcatgttgctgtcg
gcggattattcgcagatcgagctgcgcatcatggcgcacgtgtccgacgacgcgaatctg
cagcaggcgttcgcggcgggcgaggacatccaccgcgcgaccgccgcggaggtgttcggc
gtgccgctggacgaggtcgtggccgagcagcgccgcgcggccaaggcgatcaatttcggg
ctgatctacggcatgggagtgttcggcctggcgtcgaacctgggcatcacgcgggacgcg
gcgcaggcctatatcgaccgctatttcgcgcgctatccgggcgtggcgagctacatggac
atgacgcgccagctggcccgcgaacgcggctatgtggaaacggtgttcggccgccgcctt
cagatgcccgacatccgcgcggcctcgggcccgcgccgccagggcgccgaacgcgccgcg
atcaacgcgcccatgcagggcacggcggccgacctcatcaagatggccatggtggcggtg
cagcggtggctggacgagcagcagctgcgctcacgcatgatcatgcaggtgcacgacgaa
ctggtgctcgaagtgcccgacgaagaactcgacctcgtgcgcgaggccttgccgcggctg
atgtgcgaggtggccaccttgaaggtgccgctggttgccgaggtgggcgtggggaagaac
tgggagcaggcgcactga
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